Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01304

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,450,034	+		MIT1002_01303	0.69	-0.3
1,450,042	-		MIT1002_01303	0.69	+0.6
1,450,053	+		MIT1002_01303	0.69	-0.8
1,450,087	+		MIT1002_01303	0.70	-0.9
1,450,121	+		MIT1002_01303	0.71	+1.1
1,450,139	-		MIT1002_01303	0.72	-0.3
1,450,183	+		MIT1002_01303	0.73	-0.2
1,450,209	+		MIT1002_01303	0.74	+0.8
1,450,209	-		MIT1002_01303	0.74	-2.5
1,450,406	+		MIT1002_01303	0.81	+1.3
1,450,439	-		MIT1002_01303	0.82	-1.7
1,450,516	+		MIT1002_01303	0.84	-0.5
1,450,516	+		MIT1002_01303	0.84	+1.4
1,450,563	+		MIT1002_01303	0.86	-0.5
1,450,563	+		MIT1002_01303	0.86	-2.5
1,450,563	+		MIT1002_01303	0.86	+1.1
1,450,571	-		MIT1002_01303	0.86	-0.4
1,450,571	-		MIT1002_01303	0.86	+0.4
1,450,571	-		MIT1002_01303	0.86	-0.6
1,450,777	+				+0.2
1,450,777	+				+0.6
1,450,848	+				+0.5
1,450,856	-				-1.5
1,450,883	+				+0.4
1,450,883	+				+0.4
1,450,883	+				+0.6
1,450,883	+				+0.3
1,450,883	+				-0.7
1,450,883	+				-0.3
1,450,883	+				-0.0
1,450,883	+				-0.2
1,450,883	+				-0.8
1,450,883	+				-0.7
1,450,883	+				-0.4
1,450,883	+				-2.1
1,450,883	+				+0.3
1,450,883	+				+0.3
1,450,883	+				+0.4
1,450,883	+				+0.4
1,450,883	+				-0.5
1,450,883	+				+0.1
1,450,883	+				+1.3
1,450,883	+				-0.5
1,450,883	+				+0.2
1,450,883	+				-0.4
1,450,891	-				+2.1
1,450,891	-				+2.5
1,450,891	-				+0.2
1,450,891	-				+0.0
1,450,891	-				+1.4
1,450,891	-				+0.1
1,450,891	-				-2.1
1,450,891	-				-0.2
1,450,891	-				-0.2
1,450,891	-				-0.0
1,450,891	-				-0.4
1,450,891	-				-0.3
1,450,891	-				+0.2
1,450,891	-				+1.5
1,450,891	-				-1.2
1,450,891	-				-1.2
1,450,891	-				+1.4
1,450,891	-				-0.1
1,450,891	-				+0.1
1,450,893	+				+0.3
1,450,977	+				+0.4
1,451,012	+				+0.3
1,451,021	+				-1.6
1,451,039	-				+0.0
1,451,064	+				+2.6
1,451,097	+				-0.9
1,451,118	+		MIT1002_01304	0.11	+0.5
1,451,123	-		MIT1002_01304	0.11	-1.0
1,451,159	+		MIT1002_01304	0.15	-0.9
1,451,159	+		MIT1002_01304	0.15	+1.2
1,451,193	-		MIT1002_01304	0.18	-0.2
1,451,217	-		MIT1002_01304	0.20	-1.4
1,451,268	+		MIT1002_01304	0.25	-0.9
1,451,283	-		MIT1002_01304	0.26	+0.5
1,451,288	-		MIT1002_01304	0.27	-0.4
1,451,362	+		MIT1002_01304	0.34	-0.1
1,451,370	-		MIT1002_01304	0.34	+1.1
1,451,451	-		MIT1002_01304	0.42	-0.4
1,451,497	-		MIT1002_01304	0.46	+0.3
1,451,499	+		MIT1002_01304	0.47	-0.5
1,451,556	+		MIT1002_01304	0.52	+0.2
1,451,562	-		MIT1002_01304	0.53	-1.8
1,451,564	-		MIT1002_01304	0.53	+1.1
1,451,643	-		MIT1002_01304	0.60	+0.4
1,451,706	+		MIT1002_01304	0.66	-0.9
1,451,714	-		MIT1002_01304	0.67	-0.4
1,451,714	-		MIT1002_01304	0.67	+2.9
1,451,719	-		MIT1002_01304	0.67	+0.1
1,451,858	+		MIT1002_01304	0.81	+0.4
1,451,860	+		MIT1002_01304	0.81	+0.6
1,451,890	-		MIT1002_01304	0.84	+0.1
1,451,896	-		MIT1002_01304	0.84	+0.4
1,451,896	-		MIT1002_01304	0.84	-0.7
1,451,944	-		MIT1002_01304	0.89	-0.5
1,451,969	+				+2.3
1,451,969	+				+0.3
1,451,977	-				+0.9
1,452,029	-				+1.1
1,452,041	+				+1.1
1,452,078	-				+0.2
1,452,081	+				-0.5
1,452,081	+				+1.9
1,452,081	+				-0.7
1,452,089	-				-0.1
1,452,089	-				-0.4
1,452,171	+				+0.1
1,452,176	+				+0.7
1,452,176	+				-1.4
1,452,184	-				-0.2
1,452,223	+				-0.9
1,452,226	+				+0.3
1,452,233	+				+1.9
1,452,241	-				+1.1
1,452,241	-				-0.7
1,452,276	+				-0.6
1,452,279	-				+0.4
1,452,362	+				+0.6
1,452,380	-		MIT1002_01305	0.10	-1.0
1,452,398	+		MIT1002_01305	0.11	+0.5
1,452,461	-		MIT1002_01305	0.15	-0.2
1,452,461	-		MIT1002_01305	0.15	+0.2
1,452,519	+		MIT1002_01305	0.18	+1.2
1,452,542	+		MIT1002_01305	0.19	+2.4
1,452,542	+		MIT1002_01305	0.19	-0.8
1,452,542	+		MIT1002_01305	0.19	-0.5
1,452,542	+		MIT1002_01305	0.19	+0.8
1,452,549	-		MIT1002_01305	0.20	+1.1
1,452,550	-		MIT1002_01305	0.20	+0.1
1,452,550	-		MIT1002_01305	0.20	+1.5
1,452,611	+		MIT1002_01305	0.23	+0.8
1,452,611	+		MIT1002_01305	0.23	-0.1
1,452,657	+		MIT1002_01305	0.26	+1.3
1,452,665	-		MIT1002_01305	0.26	-0.9
1,452,709	-		MIT1002_01305	0.28	+3.3
1,452,730	+		MIT1002_01305	0.30	-0.5
1,452,730	+		MIT1002_01305	0.30	+1.5
1,452,738	-		MIT1002_01305	0.30	+0.3
1,452,816	+		MIT1002_01305	0.34	+0.1
1,452,819	-		MIT1002_01305	0.34	-0.2
1,452,965	-		MIT1002_01305	0.43	-0.4
1,452,987	+		MIT1002_01305	0.44	+0.4
1,452,987	+		MIT1002_01305	0.44	+0.4
1,452,987	+		MIT1002_01305	0.44	-2.1
1,452,987	+		MIT1002_01305	0.44	-0.8
1,452,995	-		MIT1002_01305	0.44	+1.4
1,452,995	-		MIT1002_01305	0.44	+1.3
1,452,997	-		MIT1002_01305	0.44	-1.9
1,453,025	+		MIT1002_01305	0.46	+1.6
1,453,025	+		MIT1002_01305	0.46	+1.0
1,453,030	+		MIT1002_01305	0.46	-0.2
1,453,040	-		MIT1002_01305	0.47	-1.4
1,453,055	+		MIT1002_01305	0.48	+0.7