Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01199

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,315,402	-				-0.9
1,315,407	-				+0.3
1,315,441	+				-1.2
1,315,449	-				-0.2
1,315,643	+		MIT1002_01198	0.36	-0.9
1,315,769	-		MIT1002_01198	0.56	+0.1
1,315,776	+		MIT1002_01198	0.57	+1.1
1,315,787	+		MIT1002_01198	0.58	+0.3
1,315,838	+		MIT1002_01198	0.67	+0.7
1,315,846	-		MIT1002_01198	0.68	-0.7
1,315,851	-		MIT1002_01198	0.69	-0.2
1,315,853	-		MIT1002_01198	0.69	-0.4
1,315,868	-		MIT1002_01198	0.71	-0.8
1,315,935	-		MIT1002_01198	0.82	-0.9
1,315,961	+		MIT1002_01198	0.86	+0.4
1,315,961	+		MIT1002_01198	0.86	-1.4
1,315,969	-		MIT1002_01198	0.87	+0.4
1,315,969	-		MIT1002_01198	0.87	+0.4
1,315,986	+		MIT1002_01198	0.90	+0.5
1,316,175	+				-1.0
1,316,198	+				-0.6
1,316,341	-				-0.7
1,316,452	-				-0.9
1,316,499	-				-1.8
1,316,596	-				-0.2
1,316,601	-				-0.9
1,316,718	+				-0.4
1,316,839	+				+0.3
1,316,985	+		MIT1002_01199	0.13	+0.7
1,316,985	-		MIT1002_01199	0.13	-0.0
1,316,988	+		MIT1002_01199	0.13	+0.0
1,317,036	-		MIT1002_01199	0.14	-1.5
1,317,036	-		MIT1002_01199	0.14	+1.7
1,317,041	-		MIT1002_01199	0.14	-1.4
1,317,076	+		MIT1002_01199	0.15	-1.3
1,317,081	+		MIT1002_01199	0.15	+0.7
1,317,089	-		MIT1002_01199	0.15	+0.3
1,317,089	-		MIT1002_01199	0.15	-1.6
1,317,177	+		MIT1002_01199	0.17	+0.3
1,317,185	-		MIT1002_01199	0.17	+1.1
1,317,298	+		MIT1002_01199	0.20	-0.3
1,317,308	+		MIT1002_01199	0.20	+0.7
1,317,316	-		MIT1002_01199	0.20	-2.3
1,317,319	+		MIT1002_01199	0.20	-0.8
1,317,324	+		MIT1002_01199	0.20	+0.3
1,317,324	+		MIT1002_01199	0.20	-1.1
1,317,324	+		MIT1002_01199	0.20	-1.0
1,317,327	-		MIT1002_01199	0.20	+0.9
1,317,334	+		MIT1002_01199	0.20	+0.4
1,317,488	-		MIT1002_01199	0.24	-2.6
1,317,560	-		MIT1002_01199	0.25	-0.2
1,317,622	-		MIT1002_01199	0.27	+0.0
1,317,624	-		MIT1002_01199	0.27	+1.1
1,317,901	+		MIT1002_01199	0.33	+1.0
1,317,901	+		MIT1002_01199	0.33	-0.0
1,317,901	+		MIT1002_01199	0.33	+1.0
1,317,901	+		MIT1002_01199	0.33	-0.4
1,317,909	-		MIT1002_01199	0.33	-1.0
1,317,909	-		MIT1002_01199	0.33	+2.9
1,317,909	-		MIT1002_01199	0.33	-4.3
1,317,909	-		MIT1002_01199	0.33	-2.1
1,317,909	-		MIT1002_01199	0.33	-0.9
1,317,909	-		MIT1002_01199	0.33	-0.1
1,317,912	+		MIT1002_01199	0.33	+1.3
1,317,919	-		MIT1002_01199	0.33	-0.3
1,317,919	-		MIT1002_01199	0.33	-1.3
1,317,936	+		MIT1002_01199	0.33	+0.8
1,317,958	+		MIT1002_01199	0.34	-0.0
1,317,967	+		MIT1002_01199	0.34	+0.3
1,317,994	-		MIT1002_01199	0.35	+1.1
1,318,024	+		MIT1002_01199	0.35	-1.0
1,318,061	+		MIT1002_01199	0.36	-1.1
1,318,061	+		MIT1002_01199	0.36	+0.3
1,318,061	+		MIT1002_01199	0.36	+0.6
1,318,116	-		MIT1002_01199	0.37	-1.1
1,318,166	-		MIT1002_01199	0.38	+0.5
1,318,216	+		MIT1002_01199	0.40	-0.8
1,318,278	+		MIT1002_01199	0.41	+0.2
1,318,542	+		MIT1002_01199	0.47	+0.2
1,318,542	+		MIT1002_01199	0.47	-0.3
1,318,542	+		MIT1002_01199	0.47	+0.1
1,318,550	-		MIT1002_01199	0.47	-0.5
1,318,599	+		MIT1002_01199	0.48	+0.8
1,318,662	-		MIT1002_01199	0.49	+0.0
1,318,670	+		MIT1002_01199	0.49	+0.4
1,318,717	-		MIT1002_01199	0.50	-0.9
1,318,959	+		MIT1002_01199	0.56	-0.6
1,319,018	-		MIT1002_01199	0.57	+0.4
1,319,089	-		MIT1002_01199	0.59	-0.3
1,319,152	+		MIT1002_01199	0.60	+1.2
1,319,152	+		MIT1002_01199	0.60	-0.3
1,319,152	+		MIT1002_01199	0.60	+0.0
1,319,152	+		MIT1002_01199	0.60	-0.9
1,319,152	+		MIT1002_01199	0.60	-0.2
1,319,152	+		MIT1002_01199	0.60	-0.1
1,319,152	+		MIT1002_01199	0.60	+0.2
1,319,152	+		MIT1002_01199	0.60	+1.2
1,319,152	+		MIT1002_01199	0.60	-0.1
1,319,152	+		MIT1002_01199	0.60	+1.6
1,319,152	+		MIT1002_01199	0.60	-0.9
1,319,152	+		MIT1002_01199	0.60	+2.0
1,319,152	+		MIT1002_01199	0.60	+1.7
1,319,152	+		MIT1002_01199	0.60	-1.6
1,319,160	-		MIT1002_01199	0.60	+0.2
1,319,160	-		MIT1002_01199	0.60	+0.9
1,319,160	-		MIT1002_01199	0.60	-1.2
1,319,160	-		MIT1002_01199	0.60	-0.6
1,319,160	-		MIT1002_01199	0.60	-0.5
1,319,160	-		MIT1002_01199	0.60	-0.5
1,319,160	-		MIT1002_01199	0.60	+0.9
1,319,160	-		MIT1002_01199	0.60	+1.5
1,319,160	-		MIT1002_01199	0.60	-0.8
1,319,172	+		MIT1002_01199	0.60	+0.2
1,319,217	-		MIT1002_01199	0.61	-0.5
1,319,217	-		MIT1002_01199	0.61	-0.3
1,319,222	-		MIT1002_01199	0.61	-0.9
1,319,263	-		MIT1002_01199	0.62	+0.9
1,319,279	-		MIT1002_01199	0.63	+0.9
1,319,441	-		MIT1002_01199	0.66	+0.4
1,319,572	+		MIT1002_01199	0.69	-1.7
1,319,575	-		MIT1002_01199	0.69	-1.2
1,319,586	+		MIT1002_01199	0.69	-1.0
1,319,586	+		MIT1002_01199	0.69	-0.6
1,319,586	+		MIT1002_01199	0.69	-0.0
1,319,586	+		MIT1002_01199	0.69	-1.6
1,319,586	+		MIT1002_01199	0.69	-0.9
1,319,586	+		MIT1002_01199	0.69	-0.2
1,319,586	+		MIT1002_01199	0.69	+1.0
1,319,586	+		MIT1002_01199	0.69	+0.4
1,319,586	+		MIT1002_01199	0.69	-2.5
1,319,586	+		MIT1002_01199	0.69	-0.6
1,319,586	+		MIT1002_01199	0.69	-0.1
1,319,586	+		MIT1002_01199	0.69	-2.0
1,319,594	-		MIT1002_01199	0.69	+0.2
1,319,594	-		MIT1002_01199	0.69	+0.7
1,319,594	-		MIT1002_01199	0.69	+1.2
1,319,594	-		MIT1002_01199	0.69	+0.8
1,319,594	-		MIT1002_01199	0.69	-1.4
1,319,594	-		MIT1002_01199	0.69	-0.8
1,319,594	-		MIT1002_01199	0.69	+0.8
1,319,594	-		MIT1002_01199	0.69	-1.7
1,319,606	-		MIT1002_01199	0.70	-1.7
1,319,676	-		MIT1002_01199	0.71	-0.8
1,319,789	-		MIT1002_01199	0.74	-0.6
1,319,791	-		MIT1002_01199	0.74	-1.2
1,319,809	-		MIT1002_01199	0.74	+0.6
1,319,816	+		MIT1002_01199	0.74	-1.8
1,319,824	-		MIT1002_01199	0.74	+0.8
1,319,969	+		MIT1002_01199	0.78	-1.6
1,319,970	+		MIT1002_01199	0.78	-0.3
1,319,977	-		MIT1002_01199	0.78	+0.2
1,319,981	+		MIT1002_01199	0.78	+1.0
1,319,989	-		MIT1002_01199	0.78	-0.5
1,319,989	-		MIT1002_01199	0.78	+2.0
1,319,989	-		MIT1002_01199	0.78	-0.1
1,319,990	-		MIT1002_01199	0.78	+0.4
1,320,033	+		MIT1002_01199	0.79	-0.6
1,320,041	-		MIT1002_01199	0.79	+0.2
1,320,041	-		MIT1002_01199	0.79	+0.5
1,320,041	-		MIT1002_01199	0.79	+0.0
1,320,048	+		MIT1002_01199	0.79	-0.1
1,320,140	+		MIT1002_01199	0.81	-1.8
1,320,140	+		MIT1002_01199	0.81	-0.2
1,320,148	-		MIT1002_01199	0.81	+1.3
1,320,247	-		MIT1002_01199	0.84	-0.6
1,320,318	+		MIT1002_01199	0.85	+2.2
1,320,344	-		MIT1002_01199	0.86	+1.0
1,320,436	+		MIT1002_01199	0.88	+1.3
1,320,436	+		MIT1002_01199	0.88	+0.5
1,320,436	+		MIT1002_01199	0.88	-0.2
1,320,444	-		MIT1002_01199	0.88	-0.5
1,320,444	-		MIT1002_01199	0.88	+2.8
1,320,444	-		MIT1002_01199	0.88	+0.5
1,320,444	-		MIT1002_01199	0.88	-0.1
1,320,444	-		MIT1002_01199	0.88	-0.1
1,320,444	-		MIT1002_01199	0.88	-0.6
1,320,454	-		MIT1002_01199	0.88	+1.1
1,320,467	+		MIT1002_01199	0.88	-2.1
1,320,477	-		MIT1002_01199	0.89	-0.4
1,320,519	-		MIT1002_01199	0.90	-0.1
1,320,519	-		MIT1002_01199	0.90	+0.6
1,320,556	+				-0.1
1,320,564	+				+0.4
1,320,617	+				-2.1
1,320,625	-				-0.4
1,320,637	+				+1.1
1,320,645	-				-0.3
1,320,645	-				-1.1
1,320,662	+				+0.9
1,320,662	+				+0.4
1,320,664	+				-0.1
1,320,685	+				-1.0
1,320,756	+				+0.1
1,320,773	+				-0.8
1,320,773	+				-0.9
1,320,774	-				-1.3
1,320,776	-				+0.7
1,320,781	-				+0.2
1,320,781	-				-0.3
1,320,810	+				+0.7
1,320,950	+				-0.1
1,321,033	-				-1.6
1,321,070	-				+0.4
1,321,124	-				+0.4
1,321,129	+				+0.7
1,321,237	-		MIT1002_01200	0.15	+0.2
1,321,296	-		MIT1002_01200	0.20	-0.7
1,321,370	+		MIT1002_01200	0.26	-2.8
1,321,454	-		MIT1002_01200	0.33	+0.5
1,321,456	+		MIT1002_01200	0.33	-0.1
1,321,483	+		MIT1002_01200	0.35	+0.7
1,321,496	-		MIT1002_01200	0.36	+1.2
1,321,571	+		MIT1002_01200	0.42	+0.3
1,321,571	+		MIT1002_01200	0.42	-2.0
1,321,576	+		MIT1002_01200	0.42	-1.4
1,321,579	-		MIT1002_01200	0.43	+0.5
1,321,609	+		MIT1002_01200	0.45	+0.4
1,321,699	+		MIT1002_01200	0.52	-0.7
1,321,729	+		MIT1002_01200	0.55	+1.9
1,321,731	+		MIT1002_01200	0.55	-0.5
1,321,731	+		MIT1002_01200	0.55	-1.6
1,321,731	+		MIT1002_01200	0.55	+2.2
1,321,731	+		MIT1002_01200	0.55	-0.7
1,321,731	+		MIT1002_01200	0.55	+0.3
1,321,731	+		MIT1002_01200	0.55	-1.1
1,321,739	-		MIT1002_01200	0.55	+2.7
1,321,739	-		MIT1002_01200	0.55	-0.8
1,321,764	+		MIT1002_01200	0.57	-0.9
1,321,765	+		MIT1002_01200	0.57	-0.3
1,321,860	+		MIT1002_01200	0.65	-0.3
1,321,860	+		MIT1002_01200	0.65	+0.1
1,321,870	-		MIT1002_01200	0.66	-1.2
1,321,889	+		MIT1002_01200	0.67	-0.1
1,321,932	+		MIT1002_01200	0.71	+0.3
1,321,940	-		MIT1002_01200	0.71	+1.0
1,321,940	-		MIT1002_01200	0.71	+0.4
1,322,000	+		MIT1002_01200	0.76	+0.1