Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00914

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,011,259	-				-0.3
1,011,276	-				-0.9
1,011,283	-				+2.3
1,011,298	-				-1.5
1,011,351	+				+1.2
1,011,358	+				-2.2
1,011,366	-				-0.1
1,011,376	-				-1.0
1,011,417	+				-0.6
1,011,443	+				-0.4
1,011,476	-				+0.4
1,011,575	+				+0.5
1,011,590	+				+0.7
1,011,697	-				-2.4
1,011,732	+				-0.5
1,011,762	+				-4.0
1,011,887	+		MIT1002_00913	0.12	+1.0
1,011,895	-		MIT1002_00913	0.14	-0.6
1,011,953	+		MIT1002_00913	0.29	-1.5
1,012,025	+		MIT1002_00913	0.48	-0.4
1,012,219	-				+0.3
1,012,306	-				+1.6
1,012,362	+		MIT1002_00914	0.15	+1.0
1,012,394	+		MIT1002_00914	0.18	+0.5
1,012,407	+		MIT1002_00914	0.19	+0.5
1,012,408	+		MIT1002_00914	0.19	+0.8
1,012,499	-		MIT1002_00914	0.29	-2.3
1,012,522	+		MIT1002_00914	0.32	+0.6
1,012,552	+		MIT1002_00914	0.35	-0.2
1,012,560	-		MIT1002_00914	0.36	+0.4
1,012,662	+		MIT1002_00914	0.47	-0.5
1,012,801	+		MIT1002_00914	0.62	+1.8
1,012,824	-		MIT1002_00914	0.64	+1.3
1,012,853	-		MIT1002_00914	0.67	+0.1
1,012,856	+		MIT1002_00914	0.68	+2.7
1,012,876	-		MIT1002_00914	0.70	-0.2
1,013,002	+		MIT1002_00914	0.83	+0.1
1,013,034	+		MIT1002_00914	0.87	-0.3
1,013,066	+				+1.0
1,013,112	-				+0.2
1,013,202	+				+0.6
1,013,242	+				-0.3
1,013,277	-				-1.5
1,013,293	+				-1.7
1,013,320	+				+2.0
1,013,341	+				+0.1
1,013,344	-				-1.6
1,013,349	-				+0.7
1,013,349	-				+0.2
1,013,398	-				-0.0
1,013,417	+				-1.3
1,013,461	+				+0.6
1,013,468	+				+1.6
1,013,468	+				-0.3
1,013,478	+				+0.1
1,013,741	+		MIT1002_00915	0.24	+0.6
1,013,741	+		MIT1002_00915	0.24	+2.0
1,013,765	+		MIT1002_00915	0.27	+1.2
1,013,768	-		MIT1002_00915	0.27	-0.3
1,013,773	-		MIT1002_00915	0.27	+0.7
1,013,788	-		MIT1002_00915	0.29	+0.1
1,013,835	+		MIT1002_00915	0.33	-1.6
1,013,844	-		MIT1002_00915	0.34	+0.7
1,013,925	+		MIT1002_00915	0.41	-0.1
1,013,925	+		MIT1002_00915	0.41	+1.1
1,013,925	+		MIT1002_00915	0.41	-0.1
1,013,933	-		MIT1002_00915	0.42	-1.2
1,013,933	-		MIT1002_00915	0.42	+1.9
1,013,933	-		MIT1002_00915	0.42	+2.2
1,013,972	-		MIT1002_00915	0.45	+1.3
1,014,031	-		MIT1002_00915	0.51	-0.8