Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00912

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,008,615	-				-1.9
1,008,635	-				-0.1
1,008,635	-				+0.0
1,008,657	-				+0.2
1,008,741	+		MIT1002_00911	0.17	+0.4
1,008,771	-		MIT1002_00911	0.20	-2.3
1,008,771	-		MIT1002_00911	0.20	-0.5
1,008,851	+		MIT1002_00911	0.29	-1.2
1,008,953	+		MIT1002_00911	0.40	+1.7
1,008,959	-		MIT1002_00911	0.41	+0.0
1,008,961	-		MIT1002_00911	0.41	+0.5
1,008,961	-		MIT1002_00911	0.41	-0.6
1,008,961	-		MIT1002_00911	0.41	+0.1
1,008,961	-		MIT1002_00911	0.41	+0.9
1,008,961	-		MIT1002_00911	0.41	+1.5
1,008,961	-		MIT1002_00911	0.41	+0.5
1,009,197	-		MIT1002_00911	0.67	+1.0
1,009,197	-		MIT1002_00911	0.67	-0.9
1,009,210	+		MIT1002_00911	0.68	+1.3
1,009,210	+		MIT1002_00911	0.68	-1.7
1,009,250	+		MIT1002_00911	0.73	+0.8
1,009,267	+		MIT1002_00911	0.75	+0.2
1,009,267	+		MIT1002_00911	0.75	-0.1
1,009,287	-		MIT1002_00911	0.77	+0.8
1,009,325	-		MIT1002_00911	0.81	-0.6
1,009,415	-				-1.6
1,009,457	+				-1.4
1,009,475	-				-0.5
1,009,478	+				+0.7
1,009,486	-				-1.0
1,009,712	-				+0.6
1,009,752	+				+1.4
1,009,752	+				+0.9
1,009,752	+				-1.1
1,009,760	-		MIT1002_00912	0.10	-1.4
1,009,760	-		MIT1002_00912	0.10	-1.7
1,009,760	-		MIT1002_00912	0.10	-0.5
1,009,826	-		MIT1002_00912	0.15	-1.4
1,009,875	-		MIT1002_00912	0.18	-0.2
1,009,882	+		MIT1002_00912	0.18	+1.3
1,009,903	-		MIT1002_00912	0.19	+2.8
1,009,923	-		MIT1002_00912	0.21	-1.5
1,009,963	-		MIT1002_00912	0.23	+0.6
1,010,011	+		MIT1002_00912	0.26	-2.4
1,010,011	+		MIT1002_00912	0.26	+1.7
1,010,062	-		MIT1002_00912	0.29	+1.2
1,010,119	+		MIT1002_00912	0.33	+2.4
1,010,127	-		MIT1002_00912	0.34	-0.0
1,010,153	-		MIT1002_00912	0.35	-0.0
1,010,197	+		MIT1002_00912	0.38	-0.5
1,010,200	-		MIT1002_00912	0.38	+1.8
1,010,202	+		MIT1002_00912	0.38	+3.4
1,010,266	+		MIT1002_00912	0.42	+0.8
1,010,281	-		MIT1002_00912	0.43	+0.4
1,010,498	+		MIT1002_00912	0.57	-0.9
1,010,498	+		MIT1002_00912	0.57	+0.8
1,010,766	+		MIT1002_00912	0.74	+0.3
1,010,766	+		MIT1002_00912	0.74	+1.9
1,010,766	+		MIT1002_00912	0.74	-0.3
1,010,766	+		MIT1002_00912	0.74	-1.0
1,010,774	-		MIT1002_00912	0.74	+0.1
1,010,774	-		MIT1002_00912	0.74	-0.7
1,010,774	-		MIT1002_00912	0.74	-2.4
1,010,774	-		MIT1002_00912	0.74	-0.5
1,010,870	-		MIT1002_00912	0.80	-2.2
1,011,043	-				-1.6
1,011,076	-				+0.0
1,011,156	-				-0.8
1,011,259	-				-0.3
1,011,276	-				-0.9
1,011,283	-				+2.3
1,011,298	-				-1.5
1,011,351	+				+1.2
1,011,358	+				-2.2
1,011,366	-				-0.1
1,011,376	-				-1.0
1,011,417	+				-0.6
1,011,443	+				-0.4
1,011,476	-				+0.4
1,011,575	+				+0.5
1,011,590	+				+0.7
1,011,697	-				-2.4
1,011,732	+				-0.5
1,011,762	+				-4.0
1,011,887	+		MIT1002_00913	0.12	+1.0
1,011,895	-		MIT1002_00913	0.14	-0.6
1,011,953	+		MIT1002_00913	0.29	-1.5
1,012,025	+		MIT1002_00913	0.48	-0.4