Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00073

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
78,669	-		MIT1002_00072	0.66	+1.3
78,768	-		MIT1002_00072	0.70	+1.9
78,792	+		MIT1002_00072	0.71	+1.8
78,926	+		MIT1002_00072	0.76	+1.7
79,010	+		MIT1002_00072	0.79	+1.8
79,040	+		MIT1002_00072	0.80	+2.1
79,048	-		MIT1002_00072	0.80	+1.7
79,048	-		MIT1002_00072	0.80	+2.1
79,075	-		MIT1002_00072	0.82	+1.8
79,077	-		MIT1002_00072	0.82	+1.5
79,084	-		MIT1002_00072	0.82	+1.0
79,117	+		MIT1002_00072	0.83	+1.8
79,117	+		MIT1002_00072	0.83	+2.7
79,144	-		MIT1002_00072	0.84	+1.2
79,213	+		MIT1002_00072	0.87	+0.2
79,395	+				+1.9
79,423	+				+1.5
79,423	+				+1.8
79,431	-				+2.4
79,447	+				+2.2
79,463	-				+1.3
79,498	+				+1.6
79,506	-				+2.2
79,721	-		MIT1002_00073	0.15	-1.3
79,742	+		MIT1002_00073	0.20	-1.1
79,742	+		MIT1002_00073	0.20	+1.2
79,798	-		MIT1002_00073	0.34	-1.8
79,903	-		MIT1002_00073	0.60	-0.8
80,116	-				+2.0
80,166	+				-0.4
80,230	-				-0.6
80,235	-				+0.2
80,257	+				+1.8
80,259	+				+0.1
80,301	+				-1.2
80,351	-		MIT1002_00074	0.26	-1.0
80,351	-		MIT1002_00074	0.26	-1.7
80,365	+		MIT1002_00074	0.44	-2.0
80,368	-		MIT1002_00074	0.48	-1.2
80,376	+		MIT1002_00074	0.58	+1.0
80,376	+		MIT1002_00074	0.58	-0.7
80,400	-				-1.8
80,400	-				-2.1
80,432	+				+1.4
80,441	-				-0.1
80,442	+				+1.0
80,456	+				+0.8
80,512	+				-1.3
80,578	-		MIT1002_00075	0.13	-0.9
80,578	-		MIT1002_00075	0.13	+0.6
80,578	-		MIT1002_00075	0.13	+0.9
80,659	+		MIT1002_00075	0.20	+1.0
80,659	+		MIT1002_00075	0.20	-1.6
80,665	-		MIT1002_00075	0.20	+0.6
80,735	-		MIT1002_00075	0.26	+2.3
80,735	-		MIT1002_00075	0.26	+0.5
80,743	-		MIT1002_00075	0.27	+0.8
80,765	+		MIT1002_00075	0.28	+1.1
80,765	+		MIT1002_00075	0.28	-0.6
80,773	-		MIT1002_00075	0.29	+0.5
80,783	-		MIT1002_00075	0.30	-0.7
80,801	-		MIT1002_00075	0.31	-1.0
80,801	-		MIT1002_00075	0.31	-1.9
80,809	-		MIT1002_00075	0.32	+1.2
80,853	+		MIT1002_00075	0.36	-1.6
80,976	+		MIT1002_00075	0.46	+1.4
80,976	+		MIT1002_00075	0.46	-0.5
80,976	+		MIT1002_00075	0.46	-0.6
80,984	-		MIT1002_00075	0.47	-0.4
80,984	-		MIT1002_00075	0.47	+1.5
80,984	-		MIT1002_00075	0.47	+2.8
81,002	-		MIT1002_00075	0.48	+0.5
81,052	+		MIT1002_00075	0.53	-1.4
81,060	+		MIT1002_00075	0.53	+2.4