Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS27065

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
6,035,777	+		QEN71_RS27055	0.15	+1.2
6,035,777	+		QEN71_RS27055	0.15	+2.1
6,035,777	+		QEN71_RS27055	0.15	-1.5
6,035,777	+		QEN71_RS27055	0.15	-0.3
6,035,778	-		QEN71_RS27055	0.16	-0.5
6,035,778	-		QEN71_RS27055	0.16	-0.3
6,035,868	+		QEN71_RS27055	0.34	-1.2
6,035,868	+		QEN71_RS27055	0.34	-0.8
6,035,868	+		QEN71_RS27055	0.34	+1.1
6,035,868	+		QEN71_RS27055	0.34	-1.0
6,035,868	+		QEN71_RS27055	0.34	-0.3
6,035,868	+		QEN71_RS27055	0.34	-0.3
6,035,869	-		QEN71_RS27055	0.34	-0.1
6,035,869	-		QEN71_RS27055	0.34	-0.6
6,035,869	-		QEN71_RS27055	0.34	-0.8
6,035,869	-		QEN71_RS27055	0.34	-0.2
6,035,869	-		QEN71_RS27055	0.34	-0.6
6,035,869	-		QEN71_RS27055	0.34	+0.9
6,036,089	+		QEN71_RS27055	0.78	+1.6
6,036,090	-		QEN71_RS27055	0.78	-1.2
6,036,090	-		QEN71_RS27055	0.78	-0.2
6,036,090	-		QEN71_RS27055	0.78	+0.5
6,036,090	-		QEN71_RS27055	0.78	-0.3
6,036,090	-		QEN71_RS27055	0.78	+0.9
6,036,090	-		QEN71_RS27055	0.78	+0.4
6,036,090	-		QEN71_RS27055	0.78	-1.9
6,036,090	-		QEN71_RS27055	0.78	-0.9
6,036,090	-		QEN71_RS27055	0.78	-0.5
6,036,293	+		QEN71_RS27060	0.16	+0.2
6,036,293	+		QEN71_RS27060	0.16	+1.0
6,036,293	+		QEN71_RS27060	0.16	+1.3
6,036,293	+		QEN71_RS27060	0.16	+0.1
6,036,293	+		QEN71_RS27060	0.16	+0.3
6,036,293	+		QEN71_RS27060	0.16	-0.8
6,036,294	-		QEN71_RS27060	0.17	+0.3
6,036,294	-		QEN71_RS27060	0.17	-1.0
6,036,294	-		QEN71_RS27060	0.17	+0.6
6,036,294	-		QEN71_RS27060	0.17	+0.5
6,036,359	+		QEN71_RS27060	0.29	+0.0
6,036,359	+		QEN71_RS27060	0.29	+0.6
6,036,359	+		QEN71_RS27060	0.29	+0.5
6,036,359	+		QEN71_RS27060	0.29	-0.2
6,036,359	+		QEN71_RS27060	0.29	-0.2
6,036,359	+		QEN71_RS27060	0.29	-0.1
6,036,359	+		QEN71_RS27060	0.29	+1.8
6,036,359	+		QEN71_RS27060	0.29	-0.2
6,036,359	+		QEN71_RS27060	0.29	+0.4
6,036,359	+		QEN71_RS27060	0.29	-1.0
6,036,359	+		QEN71_RS27060	0.29	-0.6
6,036,359	+		QEN71_RS27060	0.29	-0.5
6,036,359	+		QEN71_RS27060	0.29	+0.6
6,036,359	+		QEN71_RS27060	0.29	+0.3
6,036,359	+		QEN71_RS27060	0.29	+0.3
6,036,359	+		QEN71_RS27060	0.29	-0.3
6,036,359	+		QEN71_RS27060	0.29	+0.6
6,036,360	-		QEN71_RS27060	0.29	+0.5
6,036,360	-		QEN71_RS27060	0.29	-0.3
6,036,360	-		QEN71_RS27060	0.29	+0.1
6,036,360	-		QEN71_RS27060	0.29	+0.4
6,036,360	-		QEN71_RS27060	0.29	+0.4
6,036,360	-		QEN71_RS27060	0.29	-1.7
6,036,360	-		QEN71_RS27060	0.29	-1.7
6,036,360	-		QEN71_RS27060	0.29	+0.9
6,036,360	-		QEN71_RS27060	0.29	-0.3
6,036,360	-		QEN71_RS27060	0.29	-1.2
6,036,360	-		QEN71_RS27060	0.29	+0.8
6,036,360	-		QEN71_RS27060	0.29	-0.7
6,036,360	-		QEN71_RS27060	0.29	-0.5
6,036,360	-		QEN71_RS27060	0.29	-1.1
6,036,360	-		QEN71_RS27060	0.29	-0.2
6,036,360	-		QEN71_RS27060	0.29	-1.7
6,036,362	+		QEN71_RS27060	0.30	-0.2
6,036,362	+		QEN71_RS27060	0.30	-0.4
6,036,362	+		QEN71_RS27060	0.30	+0.6
6,036,363	-		QEN71_RS27060	0.30	-2.0
6,036,363	-		QEN71_RS27060	0.30	-0.2
6,036,363	-		QEN71_RS27060	0.30	+0.3
6,036,363	-		QEN71_RS27060	0.30	+0.3
6,036,363	-		QEN71_RS27060	0.30	-2.2
6,036,363	-		QEN71_RS27060	0.30	+0.8
6,036,363	-		QEN71_RS27060	0.30	-0.1
6,036,428	+		QEN71_RS27060	0.43	-0.2
6,036,428	+		QEN71_RS27060	0.43	+0.1
6,036,428	+		QEN71_RS27060	0.43	-1.2
6,036,444	+		QEN71_RS27060	0.46	+0.9
6,036,452	+		QEN71_RS27060	0.47	-1.5
6,036,452	+		QEN71_RS27060	0.47	+2.2
6,036,452	+		QEN71_RS27060	0.47	+0.4
6,036,452	+		QEN71_RS27060	0.47	+0.5
6,036,452	+		QEN71_RS27060	0.47	+1.3
6,036,453	-		QEN71_RS27060	0.48	+0.3
6,036,453	-		QEN71_RS27060	0.48	-0.4
6,036,453	-		QEN71_RS27060	0.48	-2.2
6,036,453	-		QEN71_RS27060	0.48	-0.5
6,036,668	+		QEN71_RS27060	0.89	-0.0
6,036,669	-		QEN71_RS27060	0.90	-1.1
6,036,669	-		QEN71_RS27060	0.90	-1.6
6,036,719	+				-0.1
6,036,720	-				+0.1
6,037,194	+		QEN71_RS27065	0.54	-0.2
6,037,194	+		QEN71_RS27065	0.54	-0.7
6,037,374	+		QEN71_RS27065	0.76	+0.4
6,037,375	-		QEN71_RS27065	0.76	+0.4
6,037,380	-		QEN71_RS27065	0.77	+0.4
6,037,568	-				+0.1
6,037,568	-				+0.4
6,037,568	-				-0.5
6,037,607	-				-1.3
6,037,607	-				-0.5
6,037,673	+				+0.4
6,037,673	+				-0.2
6,037,674	-				-0.2
6,037,674	-				-0.5
6,037,674	-				-1.6
6,037,674	-				+0.4
6,037,892	+		QEN71_RS27070	0.19	-0.2
6,037,892	+		QEN71_RS27070	0.19	-0.9
6,037,892	+		QEN71_RS27070	0.19	-0.1
6,037,893	-		QEN71_RS27070	0.19	-0.5
6,037,901	+		QEN71_RS27070	0.20	+1.0
6,037,901	+		QEN71_RS27070	0.20	-1.0
6,037,901	+		QEN71_RS27070	0.20	+1.0
6,037,901	+		QEN71_RS27070	0.20	+0.1
6,037,901	+		QEN71_RS27070	0.20	+2.8
6,037,901	+		QEN71_RS27070	0.20	-0.2
6,037,901	+		QEN71_RS27070	0.20	+0.6
6,037,901	+		QEN71_RS27070	0.20	-1.0
6,037,901	+		QEN71_RS27070	0.20	-1.6
6,037,901	+		QEN71_RS27070	0.20	+1.6
6,037,901	+		QEN71_RS27070	0.20	-0.7
6,037,901	+		QEN71_RS27070	0.20	-1.1
6,037,901	+		QEN71_RS27070	0.20	+0.0
6,037,901	+		QEN71_RS27070	0.20	+0.4
6,037,901	+		QEN71_RS27070	0.20	-0.4
6,037,902	-		QEN71_RS27070	0.20	+2.2
6,037,902	-		QEN71_RS27070	0.20	-3.2
6,037,902	-		QEN71_RS27070	0.20	-0.8
6,037,902	-		QEN71_RS27070	0.20	+0.5
6,037,902	-		QEN71_RS27070	0.20	+0.0
6,037,902	-		QEN71_RS27070	0.20	+0.2
6,037,902	-		QEN71_RS27070	0.20	+0.4
6,037,902	-		QEN71_RS27070	0.20	+0.7
6,037,902	-		QEN71_RS27070	0.20	+0.0
6,037,902	-		QEN71_RS27070	0.20	-1.9
6,037,902	-		QEN71_RS27070	0.20	+0.0
6,037,902	-		QEN71_RS27070	0.20	-0.4
6,037,904	+		QEN71_RS27070	0.20	-1.4
6,037,904	+		QEN71_RS27070	0.20	-0.6
6,037,904	+		QEN71_RS27070	0.20	-0.5
6,037,905	-		QEN71_RS27070	0.20	-0.4
6,037,911	+		QEN71_RS27070	0.21	+0.4
6,037,912	-		QEN71_RS27070	0.21	-0.5
6,038,228	+		QEN71_RS27070	0.51	-0.8
6,038,228	+		QEN71_RS27070	0.51	-0.6
6,038,228	+		QEN71_RS27070	0.51	+0.8
6,038,228	+		QEN71_RS27070	0.51	+0.3
6,038,228	+		QEN71_RS27070	0.51	+0.4
6,038,228	+		QEN71_RS27070	0.51	+0.5
6,038,228	+		QEN71_RS27070	0.51	-0.3
6,038,228	+		QEN71_RS27070	0.51	-0.8
6,038,229	-		QEN71_RS27070	0.51	-1.1
6,038,229	-		QEN71_RS27070	0.51	+0.8
6,038,229	-		QEN71_RS27070	0.51	-1.6
6,038,229	-		QEN71_RS27070	0.51	+0.3
6,038,229	-		QEN71_RS27070	0.51	+0.1
6,038,229	-		QEN71_RS27070	0.51	-0.2
6,038,229	-		QEN71_RS27070	0.51	+0.9
6,038,229	-		QEN71_RS27070	0.51	-1.2
6,038,253	-		QEN71_RS27070	0.53	+0.4
6,038,253	-		QEN71_RS27070	0.53	+0.4
6,038,447	+		QEN71_RS27070	0.71	+0.3
6,038,447	+		QEN71_RS27070	0.71	+0.7
6,038,448	-		QEN71_RS27070	0.71	-0.5
6,038,448	-		QEN71_RS27070	0.71	+0.7
6,038,448	-		QEN71_RS27070	0.71	+0.4