Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22310

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,951,327	+				+0.6
4,951,327	+				-1.1
4,951,327	+				-0.8
4,951,327	+				+0.4
4,951,327	+				-2.1
4,951,327	+				-0.9
4,951,327	+				+0.4
4,951,327	+				+0.1
4,951,328	-				+0.1
4,951,328	-				-0.3
4,951,328	-				+0.1
4,951,328	-				-0.6
4,951,328	-				+0.2
4,951,328	-				-0.9
4,951,328	-				+1.1
4,951,328	-				+0.8
4,951,328	-				+0.7
4,951,328	-				-0.2
4,951,331	+				+0.9
4,951,331	+				+0.5
4,951,331	+				+0.4
4,951,332	-				-1.9
4,951,332	-				+0.2
4,951,332	-				+0.4
4,951,332	-				-0.9
4,951,336	+				-0.7
4,951,337	-				+1.2
4,951,408	+				-0.7
4,951,408	+				-0.1
4,951,409	-				-0.2
4,951,409	-				+0.3
4,951,409	-				-0.3
4,951,409	-				+0.4
4,951,423	+				+3.6
4,951,423	+				+1.7
4,951,423	+				+1.5
4,951,423	+				-1.8
4,951,423	+				+0.9
4,951,423	+				+1.7
4,951,423	+				-0.9
4,951,423	+				+1.1
4,951,424	-				+0.2
4,951,424	-				+0.7
4,951,424	-				+0.1
4,951,424	-				+0.2
4,951,424	-				+1.4
4,951,424	-				+0.6
4,951,426	+				+0.2
4,951,426	+				+0.4
4,951,426	+				+3.1
4,951,426	+				-1.5
4,951,426	+				-1.5
4,951,426	+				+2.1
4,951,426	+				-0.1
4,951,426	+				+0.7
4,951,426	+				+0.4
4,951,426	+				+0.3
4,951,427	-				-1.1
4,951,427	-				-1.4
4,951,427	-				+1.1
4,951,427	-				-1.4
4,951,427	-				+0.8
4,951,427	-				-1.5
4,951,427	-				-2.6
4,951,427	-				+0.4
4,951,427	-				-0.3
4,951,446	-				+0.2
4,951,446	-				-1.0
4,951,453	+				+0.1
4,951,453	+				-1.2
4,951,453	+				-2.1
4,951,453	+				+1.2
4,951,454	-				-1.3
4,951,459	-				+0.1
4,951,522	+				-0.1
4,951,522	+				+1.6
4,951,522	+				-0.8
4,951,522	+				-1.4
4,951,522	+				-0.4
4,951,523	-				-1.4
4,951,590	+				-0.2
4,951,590	+				-0.9
4,951,590	+				-0.4
4,951,590	+				-0.5
4,951,590	+				-0.6
4,951,590	+				-1.4
4,951,590	+				-0.7
4,951,590	+				-0.9
4,951,632	+				-2.1
4,951,632	+				-2.1
4,951,632	+				+0.1
4,951,976	+				+0.4
4,951,977	-				+0.1
4,951,977	-				-0.4
4,951,977	-				+0.1
4,952,148	+				+0.6
4,952,148	+				+0.1
4,952,148	+				+2.4
4,952,148	+				+0.9
4,952,148	+				-1.4
4,952,148	+				+0.6
4,952,153	+				+0.4
4,952,153	+				-0.4
4,952,153	+				+0.4
4,952,153	+				+0.1
4,952,153	+				-0.7
4,952,153	+				+1.6
4,952,153	+				-0.2
4,952,153	+				+0.0
4,952,153	+				+0.2
4,952,153	+				+0.1
4,952,162	+				+0.1
4,952,182	+				+1.1
4,952,182	+				+0.5
4,952,182	+				+0.5
4,952,182	+				-0.1
4,952,182	+				-0.6
4,952,182	+				+0.8
4,952,182	+				+1.3
4,952,182	+				+0.5
4,953,530	+				-0.1
4,953,531	-				-0.2
4,953,531	-				+0.0
4,953,531	-				-1.0
4,953,531	-				+0.8
4,953,531	-				-0.9
4,953,638	+				-0.9
4,953,638	+				+0.6
4,953,638	+				-0.5
4,953,638	+				+0.2
4,953,639	-				+0.5
4,953,644	+				+0.4
4,953,644	+				+1.4
4,953,644	+				-1.3
4,953,644	+				+1.1
4,953,644	+				+0.3
4,953,644	+				+1.4
4,953,644	+				-1.3
4,953,644	+				-0.8
4,953,645	-				-0.2
4,953,645	-				-0.2
4,953,645	-				-1.8
4,953,645	-				+0.5
4,953,645	-				+1.2
4,953,645	-				+0.2
4,953,648	+				-0.2
4,953,648	+				-0.3
4,953,648	+				-0.1
4,953,648	+				-0.9
4,953,648	+				-0.5
4,953,648	+				+1.3
4,953,648	+				+1.0
4,953,648	+				-0.8
4,953,648	+				+0.8
4,953,648	+				-0.4
4,953,648	+				+0.2
4,953,648	+				+0.0
4,953,649	-				+0.4
4,953,649	-				-0.6
4,953,649	-				-0.7
4,953,649	-				+0.3
4,953,649	-				-0.3
4,953,649	-				-0.5
4,953,649	-				-0.8
4,953,649	-				-1.5
4,953,649	-				-0.6
4,953,649	-				-0.8
4,953,649	-				-1.2
4,953,650	+				+2.1
4,953,651	-				-1.4
4,953,651	-				+0.4
4,953,651	-				-0.3
4,953,651	-				+2.1
4,953,651	-				-1.4
4,953,651	-				-0.7
4,953,761	+		QEN71_RS22315	0.16	-1.2
4,953,761	+		QEN71_RS22315	0.16	+0.0
4,953,761	+		QEN71_RS22315	0.16	+1.3
4,953,761	+		QEN71_RS22315	0.16	+0.2
4,953,761	+		QEN71_RS22315	0.16	-0.9
4,953,761	+		QEN71_RS22315	0.16	+0.2
4,953,761	+		QEN71_RS22315	0.16	+0.1
4,953,762	-		QEN71_RS22315	0.16	-1.3
4,953,762	-		QEN71_RS22315	0.16	-3.6
4,953,762	-		QEN71_RS22315	0.16	-1.5
4,953,764	+		QEN71_RS22315	0.16	-0.9
4,953,764	+		QEN71_RS22315	0.16	+0.4
4,953,764	+		QEN71_RS22315	0.16	-2.4
4,953,764	+		QEN71_RS22315	0.16	+0.4
4,953,765	-		QEN71_RS22315	0.17	-2.0
4,953,765	-		QEN71_RS22315	0.17	+0.7
4,953,818	+		QEN71_RS22315	0.27	+0.7
4,953,969	+		QEN71_RS22315	0.57	-0.4
4,953,969	+		QEN71_RS22315	0.57	-0.1
4,953,970	-		QEN71_RS22315	0.57	+0.4
4,954,082	+		QEN71_RS22315	0.79	+2.8
4,954,082	+		QEN71_RS22315	0.79	-1.0
4,954,083	-		QEN71_RS22315	0.79	-1.6
4,954,083	-		QEN71_RS22315	0.79	+0.1
4,954,083	-		QEN71_RS22315	0.79	-1.1
4,954,196	+				-0.5
4,954,196	+				-1.2
4,954,196	+				+0.6
4,954,196	+				-0.5
4,954,196	+				-2.1
4,954,196	+				+0.2
4,954,196	+				-1.4
4,954,197	-				+0.0
4,954,197	-				-1.9
4,954,197	-				-0.1
4,954,197	-				-0.8
4,954,197	-				-0.6
4,954,197	-				-1.0
4,954,197	-				-0.6
4,954,197	-				-2.6
4,954,197	-				+0.4
4,954,222	+				-0.3
4,954,222	+				+0.3
4,954,223	-				-0.1
4,954,342	+				-0.0
4,954,342	+				-0.8
4,954,342	+				-1.2
4,954,342	+				-1.1
4,954,342	+				+1.2
4,954,342	+				+0.3
4,954,343	-				+0.6
4,954,343	-				-1.2
4,954,343	-				-0.4
4,954,343	-				-0.5