Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS04545

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS04540 and QEN71_RS04545 overlap by 1 nucleotidesQEN71_RS04545 and QEN71_RS04550 are separated by 95 nucleotides QEN71_RS04540: QEN71_RS04540 - phosphate acyltransferase PlsX, at 997,192 to 998,322 _RS04540 QEN71_RS04545: QEN71_RS04545 - beta-ketoacyl-ACP synthase III, at 998,322 to 999,311 _RS04545 QEN71_RS04550: QEN71_RS04550 - ACP S-malonyltransferase, at 999,407 to 1,000,339 _RS04550 Position (kb) 998 999 1000Strain fitness (log2 ratio) -1 0 1at 998.296 kb on + strandat 998.320 kb on + strandat 998.320 kb on + strandat 999.406 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
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998,296 + +0.2
998,320 + -0.6
998,320 + -0.2
999,406 + -0.8

Or see this region's nucleotide sequence