Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04170

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
31,974	-				+0.5
32,072	+				+0.5
32,080	-				-1.3
32,091	-				+0.3
32,110	-				-0.4
32,139	-		MIT1002_04168	0.19	+0.7
32,191	-		MIT1002_04168	0.46	+2.1
32,199	+		MIT1002_04168	0.50	+0.7
32,209	+		MIT1002_04168	0.55	-0.6
32,245	+		MIT1002_04168	0.74	+0.1
32,245	+		MIT1002_04168	0.74	-1.1
32,253	-		MIT1002_04168	0.78	-0.8
32,253	-		MIT1002_04168	0.78	-0.9
32,253	-		MIT1002_04168	0.78	-0.7
32,263	-		MIT1002_04168	0.83	-0.7
32,472	-				-0.3
32,524	+		MIT1002_04169	0.45	-0.8
32,532	-		MIT1002_04169	0.50	-0.2
32,532	-		MIT1002_04169	0.50	+1.4
32,532	-		MIT1002_04169	0.50	-1.0
32,532	-		MIT1002_04169	0.50	-0.4
32,585	+		MIT1002_04169	0.88	-0.4
32,604	+				+1.9
32,604	+				-0.6
32,604	+				+0.2
32,636	-				+0.9
32,641	+				-0.6
32,641	+				+0.5
32,641	+				+0.9
32,712	+				-1.6
32,720	-				-0.3
32,720	-				-2.5
32,761	+				-0.8
32,769	-				-0.7
32,769	-				-2.9
32,771	+				+0.5
32,771	+				+0.0
32,779	-				-0.4
32,779	-				+0.8
32,779	-				+0.8
32,784	+				+0.5
32,792	-				+2.4
32,794	+				-0.1
32,863	+				-0.6
32,873	+				+0.8
32,971	-		MIT1002_04170	0.19	+0.8
32,987	+		MIT1002_04170	0.24	+0.8
33,033	-		MIT1002_04170	0.39	-0.5
33,036	-		MIT1002_04170	0.40	+0.5
33,050	+		MIT1002_04170	0.45	-0.8
33,051	-		MIT1002_04170	0.45	-2.0
33,058	-		MIT1002_04170	0.47	+0.3
33,099	+		MIT1002_04170	0.61	-0.7
33,127	+		MIT1002_04170	0.70	-0.4
33,127	+		MIT1002_04170	0.70	+0.1
33,127	+		MIT1002_04170	0.70	-1.7
33,127	+		MIT1002_04170	0.70	+0.1
33,135	-		MIT1002_04170	0.73	+0.3
33,135	-		MIT1002_04170	0.73	-0.5
33,135	-		MIT1002_04170	0.73	-0.2
33,135	-		MIT1002_04170	0.73	-0.3
33,135	-		MIT1002_04170	0.73	+1.7
33,179	+		MIT1002_04170	0.87	+0.0
33,179	+		MIT1002_04170	0.87	+0.6
33,179	+		MIT1002_04170	0.87	+0.7
33,179	+		MIT1002_04170	0.87	-0.5
33,179	+		MIT1002_04170	0.87	+0.4
33,179	+		MIT1002_04170	0.87	+0.4
33,179	+		MIT1002_04170	0.87	-0.6
33,187	-		MIT1002_04170	0.90	-1.3
33,187	-		MIT1002_04170	0.90	-1.1
33,187	-		MIT1002_04170	0.90	-3.0
33,187	-		MIT1002_04170	0.90	+1.1
33,187	-		MIT1002_04170	0.90	+0.9
33,187	-		MIT1002_04170	0.90	-0.2
33,188	-				+1.7
33,208	+				+0.3
33,208	+				+1.1
33,208	-				-1.1
33,208	-				-0.1
33,216	-				-0.2
33,265	-		MIT1002_04171	0.21	-1.5
33,265	-		MIT1002_04171	0.21	-0.2
33,329	-		MIT1002_04171	0.72	-0.7
33,386	+				+0.3
33,431	-				+0.5
33,461	+				-1.8
33,469	-				+0.3
33,478	+				-0.8
33,478	-				+0.2
33,546	-				-0.6
33,572	+				-0.8
33,614	+				+0.1
33,616	+				+0.6
33,622	-				-1.6
33,624	-				-0.0
33,624	-				-1.2
33,624	-				+0.9
33,629	+				+0.5
33,634	-				+0.6
33,641	+				-0.9
33,661	-				-1.2
33,709	+				-0.4
33,709	+				-0.2
33,735	+				+0.0
33,773	+				-0.1
33,829	+				+1.3
33,837	-				+0.6
33,851	-				-0.4
33,861	-				-1.0
33,863	+				+1.4
33,930	-				+0.8
33,940	-				-0.5
33,941	+				-0.5
33,954	-				+1.3
33,988	+				+0.5
33,996	-				+0.0
33,998	-				-0.1
34,017	-				+0.4
34,109	-				-1.6
34,147	+				-0.2
34,155	-				-0.7
34,155	-				-0.2
34,155	-				-1.2
34,155	-				+0.0
34,155	-				+2.0
34,171	-				+0.0
34,171	-				-0.4
34,182	+				+0.9