Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03641

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
4,070,477	-		MIT1002_03640	0.58	+2.6
4,070,481	+		MIT1002_03640	0.58	-2.2
4,070,481	+		MIT1002_03640	0.58	+0.0
4,070,489	-		MIT1002_03640	0.58	+0.9
4,070,524	-		MIT1002_03640	0.60	+1.2
4,070,524	-		MIT1002_03640	0.60	-1.1
4,070,524	-		MIT1002_03640	0.60	-0.6
4,070,524	-		MIT1002_03640	0.60	+0.1
4,070,524	-		MIT1002_03640	0.60	-0.3
4,070,551	-		MIT1002_03640	0.61	+0.5
4,070,562	+		MIT1002_03640	0.62	+0.1
4,070,588	-		MIT1002_03640	0.63	-1.2
4,070,588	-		MIT1002_03640	0.63	-0.3
4,070,625	+		MIT1002_03640	0.64	+0.8
4,070,783	+		MIT1002_03640	0.72	-0.7
4,070,854	-		MIT1002_03640	0.75	+0.5
4,070,878	-		MIT1002_03640	0.76	+0.7
4,070,905	-		MIT1002_03640	0.78	+0.1
4,070,917	-		MIT1002_03640	0.78	-0.2
4,071,034	+		MIT1002_03640	0.84	-0.0
4,071,063	+		MIT1002_03640	0.85	+0.5
4,071,065	-		MIT1002_03640	0.85	+0.4
4,071,075	-		MIT1002_03640	0.86	+0.1
4,071,075	-		MIT1002_03640	0.86	-0.8
4,071,094	+		MIT1002_03640	0.87	+1.8
4,071,128	-		MIT1002_03640	0.88	+0.0
4,071,161	+		MIT1002_03640	0.90	-0.7
4,071,179	-				+0.2
4,071,234	-				-0.0
4,071,242	+				+0.6
4,071,253	+				+0.9
4,071,286	+				-2.3
4,071,304	+				+0.8
4,071,374	-				+0.7
4,071,374	-				+0.3
4,071,420	-				-0.8
4,071,531	-				-0.6
4,071,607	-		MIT1002_03641	0.13	-0.2
4,071,619	+		MIT1002_03641	0.15	-1.8
4,071,722	+		MIT1002_03641	0.24	+1.7
4,071,781	-		MIT1002_03641	0.30	+0.2
4,071,909	-		MIT1002_03641	0.42	+1.8
4,071,959	-		MIT1002_03641	0.46	+0.2
4,071,986	+		MIT1002_03641	0.49	-0.2
4,071,986	+		MIT1002_03641	0.49	-0.0
4,072,024	+		MIT1002_03641	0.52	-2.1
4,072,071	+		MIT1002_03641	0.57	-1.0
4,072,108	+		MIT1002_03641	0.60	-0.8
4,072,212	+		MIT1002_03641	0.70	-3.3
4,072,240	+		MIT1002_03641	0.72	-0.2
4,072,291	-		MIT1002_03641	0.77	-0.5
4,072,292	+		MIT1002_03641	0.77	-0.0
4,072,380	-		MIT1002_03641	0.85	+1.0
4,072,380	-		MIT1002_03641	0.85	+0.3
4,072,380	-		MIT1002_03641	0.85	+0.5
4,072,380	-		MIT1002_03641	0.85	+0.6
4,072,403	-		MIT1002_03641	0.88	+1.1
4,072,405	+		MIT1002_03641	0.88	-1.5
4,072,431	-				-0.9
4,072,431	-				+0.5
4,072,460	-				-0.6
4,072,487	+				+2.4
4,072,502	+				-0.4
4,072,502	+				-0.1
4,072,616	-				+0.8
4,072,616	-				+0.9
4,072,639	+				+0.9
4,072,712	+				+0.2
4,072,712	+				+0.4
4,072,719	+				-0.5
4,072,720	-				+0.7
4,072,727	-				-0.5
4,072,805	+				-0.6
4,072,844	-				-0.3
4,072,904	-				-0.3
4,072,922	-				+2.1
4,072,959	+				+1.2
4,072,959	+				-0.3
4,072,959	+				+0.2
4,072,959	+				-0.9
4,072,959	+				+0.5
4,072,968	-				+0.8
4,073,074	+				+0.6
4,073,152	-		MIT1002_03642	0.12	+1.3
4,073,152	-		MIT1002_03642	0.12	+0.2
4,073,159	-		MIT1002_03642	0.12	-1.3
4,073,159	-		MIT1002_03642	0.12	+0.3
4,073,175	-		MIT1002_03642	0.12	-0.6
4,073,215	+		MIT1002_03642	0.13	+1.1
4,073,217	+		MIT1002_03642	0.13	-0.2
4,073,217	+		MIT1002_03642	0.13	-1.7
4,073,225	-		MIT1002_03642	0.14	+1.4
4,073,280	-		MIT1002_03642	0.15	+0.2
4,073,302	-		MIT1002_03642	0.16	+0.5
4,073,340	+		MIT1002_03642	0.17	-0.3
4,073,348	-		MIT1002_03642	0.17	-2.0
4,073,385	+		MIT1002_03642	0.19	-0.2
4,073,425	+		MIT1002_03642	0.20	-0.3