Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03635

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
4,060,410	-				-0.2
4,060,436	-				-1.7
4,060,436	-				-0.4
4,060,535	-				-0.6
4,060,537	+				+0.7
4,060,547	+				-0.4
4,060,555	-				-0.3
4,060,555	-				+0.2
4,060,650	+				-1.2
4,060,655	+				-0.7
4,060,658	-				-0.7
4,060,660	+				-0.0
4,060,660	+				-0.5
4,060,668	-				-0.4
4,060,677	-				+1.0
4,060,731	+				-0.0
4,060,821	+				-1.0
4,060,831	+				+0.4
4,060,885	-		MIT1002_03634	0.19	-0.5
4,061,017	+		MIT1002_03634	0.43	+0.4
4,061,025	-		MIT1002_03634	0.44	-1.7
4,061,025	-		MIT1002_03634	0.44	-0.4
4,061,025	-		MIT1002_03634	0.44	+0.3
4,061,086	+		MIT1002_03634	0.55	+0.4
4,061,094	-		MIT1002_03634	0.57	-1.2
4,061,115	+		MIT1002_03634	0.60	-2.4
4,061,156	-		MIT1002_03634	0.68	+0.1
4,061,158	+		MIT1002_03634	0.68	+0.4
4,061,233	-		MIT1002_03634	0.81	-0.7
4,061,268	-		MIT1002_03634	0.88	-1.3
4,061,268	-		MIT1002_03634	0.88	-0.5
4,061,321	+				+0.3
4,061,321	+				-1.1
4,061,329	-				-0.1
4,061,329	-				+2.4
4,061,432	-				-0.6
4,061,455	-		MIT1002_03635	0.12	-0.4
4,061,500	-		MIT1002_03635	0.17	+1.1
4,061,612	+		MIT1002_03635	0.31	-0.1
4,061,702	+		MIT1002_03635	0.41	-2.2
4,061,712	+		MIT1002_03635	0.43	-0.2
4,061,732	-		MIT1002_03635	0.45	+2.4
4,061,742	+		MIT1002_03635	0.46	+0.3
4,061,742	+		MIT1002_03635	0.46	+0.3
4,061,747	+		MIT1002_03635	0.47	-0.1
4,061,755	-		MIT1002_03635	0.48	+2.4
4,061,803	+		MIT1002_03635	0.54	+0.4
4,061,831	-		MIT1002_03635	0.57	+0.1
4,061,831	-		MIT1002_03635	0.57	-0.4
4,061,855	+		MIT1002_03635	0.60	-0.5
4,061,864	-		MIT1002_03635	0.61	+0.4
4,061,866	-		MIT1002_03635	0.61	+1.7
4,061,900	+		MIT1002_03635	0.65	+0.1
4,061,902	-		MIT1002_03635	0.66	-0.2
4,061,965	+		MIT1002_03635	0.73	+0.8
4,061,966	+		MIT1002_03635	0.73	-0.8
4,061,979	-		MIT1002_03635	0.75	+0.1
4,062,113	-				+1.1
4,062,128	+				-0.4
4,062,148	+				+0.5
4,062,178	+				-0.2
4,062,220	+				+0.2
4,062,300	+				-1.1
4,062,342	-				+0.2
4,062,482	+		MIT1002_03636	0.17	+0.9
4,062,490	-		MIT1002_03636	0.18	-0.7
4,062,490	-		MIT1002_03636	0.18	-0.5
4,062,490	-		MIT1002_03636	0.18	-0.0
4,062,567	-		MIT1002_03636	0.22	-3.6
4,062,578	+		MIT1002_03636	0.23	-1.1
4,062,586	-		MIT1002_03636	0.23	+0.4
4,062,586	-		MIT1002_03636	0.23	-0.6
4,062,588	+		MIT1002_03636	0.24	+1.6
4,062,595	+		MIT1002_03636	0.24	-0.6
4,062,603	-		MIT1002_03636	0.24	-0.8
4,062,609	+		MIT1002_03636	0.25	-1.1
4,062,637	-		MIT1002_03636	0.26	-1.0
4,062,706	-		MIT1002_03636	0.31	-0.9
4,062,718	+		MIT1002_03636	0.31	+0.3
4,062,718	+		MIT1002_03636	0.31	+2.1
4,062,726	-		MIT1002_03636	0.32	+0.1
4,062,726	-		MIT1002_03636	0.32	-2.1
4,062,773	-		MIT1002_03636	0.35	-0.6
4,062,836	-		MIT1002_03636	0.38	+0.6
4,062,866	+		MIT1002_03636	0.40	+0.9
4,062,933	+		MIT1002_03636	0.44	+1.8
4,062,934	-		MIT1002_03636	0.44	+0.7
4,062,956	+		MIT1002_03636	0.46	-0.9
4,062,956	+		MIT1002_03636	0.46	+0.1
4,062,956	+		MIT1002_03636	0.46	-1.1
4,062,959	-		MIT1002_03636	0.46	+0.5
4,062,964	-		MIT1002_03636	0.46	-0.1
4,062,964	-		MIT1002_03636	0.46	-3.0
4,062,964	-		MIT1002_03636	0.46	-0.6
4,062,964	-		MIT1002_03636	0.46	+0.1
4,063,127	+		MIT1002_03636	0.56	-0.0
4,063,127	+		MIT1002_03636	0.56	+0.6
4,063,134	+		MIT1002_03636	0.56	+0.3
4,063,135	+		MIT1002_03636	0.56	+2.0