Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03419

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,822,136	+				-0.7
3,822,225	-				+1.0
3,822,322	+		MIT1002_03419	0.15	-1.5
3,822,330	-		MIT1002_03419	0.16	+1.1
3,822,330	-		MIT1002_03419	0.16	-1.9
3,822,330	-		MIT1002_03419	0.16	+0.5
3,822,340	+		MIT1002_03419	0.17	+0.4
3,822,348	-		MIT1002_03419	0.18	+0.1
3,822,392	+		MIT1002_03419	0.23	+1.3
3,822,392	+		MIT1002_03419	0.23	-0.3
3,822,392	+		MIT1002_03419	0.23	+2.0
3,822,474	+		MIT1002_03419	0.33	-2.1
3,822,482	-		MIT1002_03419	0.34	+0.1
3,822,492	-		MIT1002_03419	0.35	-0.6
3,822,509	-		MIT1002_03419	0.37	+0.2
3,822,578	-		MIT1002_03419	0.45	-0.9
3,822,590	-		MIT1002_03419	0.47	-0.9
3,822,673	-		MIT1002_03419	0.57	-0.6
3,822,680	-		MIT1002_03419	0.58	+0.1
3,822,720	+		MIT1002_03419	0.62	+0.4
3,822,737	+		MIT1002_03419	0.64	-1.6
3,822,779	+		MIT1002_03419	0.69	-0.3
3,822,781	+		MIT1002_03419	0.70	-0.9
3,822,869	-		MIT1002_03419	0.80	-2.2
3,822,871	+		MIT1002_03419	0.80	-0.5
3,822,879	-		MIT1002_03419	0.81	-0.2
3,822,883	-		MIT1002_03419	0.82	-0.5
3,822,957	+				+0.1
3,822,984	+				+0.3
3,823,074	-				-2.5
3,823,091	-				+1.0
3,823,114	+				-0.1
3,823,141	+				-0.3
3,823,153	+				-0.3
3,823,161	-				+0.0
3,823,548	-		MIT1002_03420	0.43	+1.0
3,823,694	+		MIT1002_03420	0.59	-0.6
3,823,720	+		MIT1002_03420	0.62	+0.0
3,823,756	+		MIT1002_03420	0.66	-0.1
3,823,756	+		MIT1002_03420	0.66	-0.5
3,823,764	-		MIT1002_03420	0.67	-1.4
3,823,837	+		MIT1002_03420	0.75	-0.1
3,823,837	+		MIT1002_03420	0.75	-0.0
3,823,837	+		MIT1002_03420	0.75	-1.1
3,823,837	+		MIT1002_03420	0.75	+0.5
3,823,845	-		MIT1002_03420	0.76	-1.0
3,823,872	+		MIT1002_03420	0.79	+0.9
3,823,872	+		MIT1002_03420	0.79	-0.3
3,823,880	-		MIT1002_03420	0.80	-0.7
3,823,882	-		MIT1002_03420	0.80	+0.5