Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03316

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,700,763	-				-0.7
3,700,780	+				+0.8
3,700,780	+				-1.5
3,700,788	-				-1.7
3,700,788	-				-0.2
3,700,788	-				-0.1
3,700,788	-				+0.6
3,700,821	+		MIT1002_03316	0.11	+0.6
3,700,826	+		MIT1002_03316	0.11	-1.9
3,700,829	-		MIT1002_03316	0.12	+1.4
3,700,910	+		MIT1002_03316	0.21	+0.6
3,700,918	-		MIT1002_03316	0.22	-0.1
3,700,944	+		MIT1002_03316	0.25	-0.4
3,700,944	+		MIT1002_03316	0.25	+1.0
3,700,952	-		MIT1002_03316	0.26	+1.3
3,700,954	+		MIT1002_03316	0.26	-0.1
3,700,962	-		MIT1002_03316	0.27	+0.7
3,701,064	-		MIT1002_03316	0.39	-1.4
3,701,141	+		MIT1002_03316	0.48	-1.5
3,701,241	-		MIT1002_03316	0.59	+0.3
3,701,252	-		MIT1002_03316	0.61	+0.7
3,701,305	-		MIT1002_03316	0.67	+0.3
3,701,324	+		MIT1002_03316	0.69	+0.2
3,701,324	+		MIT1002_03316	0.69	+0.5
3,701,332	-		MIT1002_03316	0.70	-0.1
3,701,520	+				+0.3
3,701,609	-				-0.0
3,701,614	-				+0.8
3,701,614	-				+0.0
3,701,657	+				+0.3
3,701,690	+				-1.5
3,701,690	+				-0.1
3,701,702	+				+1.7
3,701,710	-				-1.7
3,701,710	-				-1.0
3,701,781	+				-0.8
3,701,789	-				-0.4
3,701,822	-				+0.9
3,701,852	+				-0.8
3,701,852	+				+0.3
3,701,860	-				-0.3
3,701,860	-				-0.3
3,701,860	-				+0.6
3,701,976	+		MIT1002_03317	0.17	-0.1
3,702,090	-		MIT1002_03317	0.35	+0.2
3,702,091	-		MIT1002_03317	0.35	-0.5
3,702,125	+		MIT1002_03317	0.40	+0.4
3,702,130	+		MIT1002_03317	0.41	+0.1
3,702,276	+		MIT1002_03317	0.63	-0.9
3,702,333	+		MIT1002_03317	0.71	-1.1
3,702,425	+		MIT1002_03317	0.85	-0.0
3,702,463	+				+0.9
3,702,471	+				+0.8
3,702,479	-				+0.4
3,702,479	-				+0.6
3,702,479	-				+0.5
3,702,504	-				+0.1
3,702,525	-				+0.1
3,702,558	+				-0.1
3,702,558	+				-0.5