Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02960

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,289,570	+				-0.4
3,289,743	-				+0.5
3,289,758	-				-0.2
3,289,772	-				-0.1
3,289,819	-				+1.9
3,289,893	+		MIT1002_02959	0.11	-1.3
3,289,931	-		MIT1002_02959	0.18	-0.4
3,289,948	+		MIT1002_02959	0.21	+0.3
3,289,990	+		MIT1002_02959	0.29	+0.1
3,290,002	-		MIT1002_02959	0.31	+0.5
3,290,065	+		MIT1002_02959	0.43	-1.9
3,290,159	+		MIT1002_02959	0.60	+1.2
3,290,161	-		MIT1002_02959	0.60	-0.2
3,290,182	+		MIT1002_02959	0.64	+1.8
3,290,182	-		MIT1002_02959	0.64	+0.9
3,290,314	+		MIT1002_02959	0.88	-0.4
3,290,337	-				+0.0
3,290,337	-				-0.5
3,290,370	-				-1.1
3,290,670	+				+0.3
3,290,803	-		MIT1002_02960	0.14	+0.8
3,290,831	+		MIT1002_02960	0.15	-1.0
3,290,943	+		MIT1002_02960	0.21	-0.7
3,290,943	+		MIT1002_02960	0.21	-0.4
3,290,947	+		MIT1002_02960	0.21	+0.3
3,290,956	-		MIT1002_02960	0.22	+1.0
3,290,961	-		MIT1002_02960	0.22	-2.7
3,290,961	-		MIT1002_02960	0.22	+0.5
3,290,975	-		MIT1002_02960	0.23	+0.4
3,290,981	+		MIT1002_02960	0.23	+0.1
3,290,989	-		MIT1002_02960	0.23	+1.9
3,291,041	-		MIT1002_02960	0.26	-0.2
3,291,089	-		MIT1002_02960	0.28	+0.5
3,291,115	+		MIT1002_02960	0.30	+0.9
3,291,271	+		MIT1002_02960	0.38	-0.2
3,291,291	+		MIT1002_02960	0.39	+0.5
3,291,291	+		MIT1002_02960	0.39	+0.5
3,291,299	-		MIT1002_02960	0.39	+1.3
3,291,304	+		MIT1002_02960	0.39	+1.7
3,291,304	+		MIT1002_02960	0.39	-0.6
3,291,304	+		MIT1002_02960	0.39	-0.1
3,291,304	+		MIT1002_02960	0.39	+0.5
3,291,304	+		MIT1002_02960	0.39	+0.7
3,291,304	+		MIT1002_02960	0.39	+0.1
3,291,312	-		MIT1002_02960	0.40	+1.1
3,291,312	-		MIT1002_02960	0.40	+0.1
3,291,312	-		MIT1002_02960	0.40	+0.2
3,291,316	+		MIT1002_02960	0.40	+0.2
3,291,357	+		MIT1002_02960	0.42	+0.2
3,291,539	+		MIT1002_02960	0.51	-1.1
3,291,547	-		MIT1002_02960	0.51	+0.8
3,291,547	-		MIT1002_02960	0.51	-1.6
3,291,566	+		MIT1002_02960	0.52	-2.1
3,291,568	+		MIT1002_02960	0.52	-0.2
3,291,576	-		MIT1002_02960	0.53	+1.1
3,291,598	-		MIT1002_02960	0.54	+0.5
3,291,615	+		MIT1002_02960	0.55	+0.1
3,291,627	+		MIT1002_02960	0.55	-3.1
3,291,674	+		MIT1002_02960	0.58	+0.8
3,291,682	-		MIT1002_02960	0.58	-0.3
3,291,703	+		MIT1002_02960	0.59	-1.0
3,291,722	+		MIT1002_02960	0.60	+0.6
3,291,722	+		MIT1002_02960	0.60	-0.1
3,291,969	-		MIT1002_02960	0.73	+1.8
3,291,972	+		MIT1002_02960	0.73	+1.2
3,291,980	-		MIT1002_02960	0.73	-0.7
3,292,039	+		MIT1002_02960	0.76	+1.8
3,292,047	-		MIT1002_02960	0.76	+0.9
3,292,047	-		MIT1002_02960	0.76	-0.6
3,292,047	-		MIT1002_02960	0.76	+0.5
3,292,149	+		MIT1002_02960	0.82	-1.5
3,292,153	+		MIT1002_02960	0.82	+1.0
3,292,180	+		MIT1002_02960	0.83	-0.1
3,292,180	+		MIT1002_02960	0.83	-0.1
3,292,188	-		MIT1002_02960	0.84	+0.1
3,292,236	+		MIT1002_02960	0.86	-1.0
3,292,254	-		MIT1002_02960	0.87	-0.7
3,292,317	+				-0.4
3,292,317	+				+0.9
3,292,448	+				+1.2
3,292,709	+		MIT1002_02961	0.15	-0.1
3,292,719	-		MIT1002_02961	0.16	+0.8
3,292,745	-		MIT1002_02961	0.19	+2.2
3,292,785	+		MIT1002_02961	0.24	-0.6
3,292,818	+		MIT1002_02961	0.27	-0.1
3,292,986	-		MIT1002_02961	0.47	+1.1
3,293,084	-		MIT1002_02961	0.59	+1.1
3,293,119	+		MIT1002_02961	0.63	+0.9
3,293,163	+		MIT1002_02961	0.68	+0.7
3,293,171	-		MIT1002_02961	0.69	+1.7
3,293,244	+		MIT1002_02961	0.78	-0.0
3,293,244	+		MIT1002_02961	0.78	-0.1
3,293,252	-		MIT1002_02961	0.79	+1.2
3,293,335	-		MIT1002_02961	0.89	+0.8
3,293,356	-				+1.4
3,293,407	-				+1.0