Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02897

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,219,753	-		MIT1002_02895	0.77	-0.4
3,219,756	+		MIT1002_02895	0.79	-0.0
3,219,797	-				+0.7
3,219,803	+				+2.2
3,219,843	-				-0.2
3,219,909	-				+1.3
3,219,962	-				-1.3
3,220,117	-				-0.8
3,220,166	+				+0.4
3,220,199	-				+1.4
3,220,250	+				-2.8
3,220,389	-		MIT1002_02896	0.31	-1.6
3,220,394	+		MIT1002_02896	0.32	+0.6
3,220,399	+		MIT1002_02896	0.33	+0.1
3,220,407	-		MIT1002_02896	0.35	-0.5
3,220,444	+		MIT1002_02896	0.42	-0.0
3,220,447	-		MIT1002_02896	0.43	-0.0
3,220,464	+		MIT1002_02896	0.46	-0.4
3,220,477	-		MIT1002_02896	0.49	-0.5
3,220,477	-		MIT1002_02896	0.49	+0.5
3,220,550	+		MIT1002_02896	0.64	-0.4
3,220,672	-		MIT1002_02896	0.88	+1.5
3,220,678	+		MIT1002_02896	0.89	+0.1
3,220,738	+				+0.3
3,220,801	-				-0.2
3,220,801	-				-0.7
3,220,819	-				-0.6
3,220,846	+				-0.6
3,220,854	-				-0.7
3,220,893	-				-0.5
3,220,898	-				-0.8
3,220,944	-				-0.9
3,220,952	-		MIT1002_02897	0.10	-1.2
3,221,007	-		MIT1002_02897	0.13	+0.3
3,221,133	+		MIT1002_02897	0.19	+1.2
3,221,148	+		MIT1002_02897	0.20	-0.6
3,221,166	-		MIT1002_02897	0.20	-0.0
3,221,166	-		MIT1002_02897	0.20	-0.0
3,221,166	-		MIT1002_02897	0.20	+1.4
3,221,166	-		MIT1002_02897	0.20	+0.7
3,221,166	-		MIT1002_02897	0.20	+0.8
3,221,166	-		MIT1002_02897	0.20	+0.0
3,221,176	-		MIT1002_02897	0.21	+0.4
3,221,207	-		MIT1002_02897	0.22	+0.1
3,221,224	+		MIT1002_02897	0.23	-0.5
3,221,363	+		MIT1002_02897	0.30	+0.4
3,221,493	-		MIT1002_02897	0.36	+0.7
3,221,585	+		MIT1002_02897	0.41	-0.1
3,221,585	+		MIT1002_02897	0.41	-1.0
3,221,599	+		MIT1002_02897	0.41	-0.6
3,221,633	+		MIT1002_02897	0.43	-2.1
3,221,636	-		MIT1002_02897	0.43	-2.1
3,221,641	-		MIT1002_02897	0.44	+0.0
3,221,657	-		MIT1002_02897	0.44	+0.5
3,221,735	-		MIT1002_02897	0.48	-3.3
3,221,805	+		MIT1002_02897	0.51	+0.8
3,221,813	-		MIT1002_02897	0.52	-0.8
3,221,865	-		MIT1002_02897	0.54	+0.2
3,221,876	+		MIT1002_02897	0.55	-0.4
3,221,888	+		MIT1002_02897	0.55	+0.8
3,221,888	+		MIT1002_02897	0.55	+1.1
3,221,916	+		MIT1002_02897	0.57	+1.8
3,221,927	+		MIT1002_02897	0.57	-0.8
3,221,947	-		MIT1002_02897	0.58	+0.9
3,221,976	+		MIT1002_02897	0.60	+1.1
3,221,977	+		MIT1002_02897	0.60	+0.2
3,221,980	-		MIT1002_02897	0.60	-2.0
3,221,995	+		MIT1002_02897	0.61	+0.3
3,222,062	+		MIT1002_02897	0.64	-0.4
3,222,070	-		MIT1002_02897	0.64	+0.1
3,222,171	+		MIT1002_02897	0.69	-0.3
3,222,259	+		MIT1002_02897	0.73	+1.1
3,222,259	+		MIT1002_02897	0.73	+0.0
3,222,259	+		MIT1002_02897	0.73	+0.2
3,222,267	-		MIT1002_02897	0.74	-0.1
3,222,275	+		MIT1002_02897	0.74	-0.5
3,222,314	-		MIT1002_02897	0.76	-0.7
3,222,357	-		MIT1002_02897	0.78	+0.7
3,222,368	-		MIT1002_02897	0.79	+0.4
3,222,510	-		MIT1002_02897	0.86	-0.3
3,222,538	+		MIT1002_02897	0.87	+0.7
3,222,546	-		MIT1002_02897	0.87	+0.2
3,222,546	-		MIT1002_02897	0.87	+0.3
3,222,597	-		MIT1002_02897	0.90	+0.6
3,222,672	-				-0.1
3,222,758	-				+1.6
3,222,788	-				-0.8
3,222,936	-				+0.6
3,222,981	+				+0.6
3,223,088	-		MIT1002_02898	0.19	+0.1