Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02701

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,001,390	-				-2.2
3,001,454	-		MIT1002_02701	0.12	+1.2
3,001,577	-		MIT1002_02701	0.39	+0.6
3,001,647	-		MIT1002_02701	0.54	+1.7
3,001,664	-		MIT1002_02701	0.58	-0.5
3,001,686	-		MIT1002_02701	0.63	-1.1
3,001,741	-		MIT1002_02701	0.75	+0.9
3,001,751	-		MIT1002_02701	0.78	+0.6
3,001,780	-		MIT1002_02701	0.84	+1.1
3,001,926	-				-2.1
3,001,992	+				-2.2
3,002,024	-				-0.7
3,002,169	-		MIT1002_02702	0.17	-2.6
3,002,198	-		MIT1002_02702	0.20	-5.8
3,002,307	+		MIT1002_02702	0.28	-0.8
3,002,379	-		MIT1002_02702	0.34	-3.9
3,002,409	+		MIT1002_02702	0.37	-3.5
3,002,541	-		MIT1002_02702	0.47	-0.7
3,002,610	+		MIT1002_02702	0.53	-5.8
3,002,733	-		MIT1002_02702	0.62	-3.4
3,002,733	-		MIT1002_02702	0.62	-3.7
3,002,733	-		MIT1002_02702	0.62	-1.7
3,002,733	-		MIT1002_02702	0.62	-2.7