Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02056

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
2,316,078	-				+0.9
2,316,083	-				-0.6
2,316,157	-				+0.6
2,316,211	+				-0.1
2,316,219	-		MIT1002_02055	0.10	-2.2
2,316,226	+		MIT1002_02055	0.11	-0.8
2,316,287	-		MIT1002_02055	0.18	+1.3
2,316,289	+		MIT1002_02055	0.18	-0.5
2,316,289	+		MIT1002_02055	0.18	-1.3
2,316,289	+		MIT1002_02055	0.18	+0.5
2,316,289	+		MIT1002_02055	0.18	-0.4
2,316,297	-		MIT1002_02055	0.19	-0.7
2,316,297	-		MIT1002_02055	0.19	-1.5
2,316,297	-		MIT1002_02055	0.19	-0.3
2,316,297	-		MIT1002_02055	0.19	+2.0
2,316,297	-		MIT1002_02055	0.19	+0.2
2,316,301	+		MIT1002_02055	0.19	-0.7
2,316,399	-		MIT1002_02055	0.30	-1.5
2,316,419	+		MIT1002_02055	0.32	+0.6
2,316,615	+		MIT1002_02055	0.54	+0.1
2,316,623	-		MIT1002_02055	0.55	+0.0
2,316,627	+		MIT1002_02055	0.55	+0.6
2,316,645	-		MIT1002_02055	0.57	+1.0
2,316,682	-		MIT1002_02055	0.62	+0.7
2,316,687	-		MIT1002_02055	0.62	+0.4
2,316,726	+		MIT1002_02055	0.66	-1.6
2,316,749	+		MIT1002_02055	0.69	-0.2
2,316,749	-		MIT1002_02055	0.69	+0.3
2,316,749	-		MIT1002_02055	0.69	+0.0
2,316,749	-		MIT1002_02055	0.69	-0.5
2,316,757	-		MIT1002_02055	0.70	-1.0
2,316,806	+		MIT1002_02055	0.75	+1.1
2,316,849	+		MIT1002_02055	0.80	-0.5
2,316,854	+		MIT1002_02055	0.81	+0.2
2,316,854	+		MIT1002_02055	0.81	-1.9
2,316,854	+		MIT1002_02055	0.81	+0.2
2,316,862	-		MIT1002_02055	0.82	-0.6
2,316,911	-		MIT1002_02055	0.87	-0.7
2,316,930	+		MIT1002_02055	0.89	+0.7
2,317,029	+				+0.8
2,317,278	+		MIT1002_02056	0.24	+0.8
2,317,278	+		MIT1002_02056	0.24	-0.1
2,317,283	-		MIT1002_02056	0.25	-0.3
2,317,286	-		MIT1002_02056	0.25	+0.0
2,317,333	-		MIT1002_02056	0.30	-0.5
2,317,338	+		MIT1002_02056	0.31	+1.3
2,317,357	-		MIT1002_02056	0.33	+0.2
2,317,367	-		MIT1002_02056	0.34	-0.4
2,317,380	+		MIT1002_02056	0.36	+1.2
2,317,448	-		MIT1002_02056	0.43	-0.8
2,317,481	+		MIT1002_02056	0.47	-0.5
2,317,489	-		MIT1002_02056	0.48	-0.2
2,317,489	-		MIT1002_02056	0.48	+0.5
2,317,489	-		MIT1002_02056	0.48	-0.1
2,317,527	+		MIT1002_02056	0.52	+0.0
2,317,527	+		MIT1002_02056	0.52	-0.8
2,317,535	-		MIT1002_02056	0.53	+0.3
2,317,673	+		MIT1002_02056	0.69	+0.1
2,317,684	+		MIT1002_02056	0.70	+0.4
2,317,723	-		MIT1002_02056	0.74	+0.4
2,317,750	-		MIT1002_02056	0.77	-1.0
2,317,774	+		MIT1002_02056	0.80	+0.6
2,317,793	+		MIT1002_02056	0.82	+0.7
2,317,823	+		MIT1002_02056	0.86	-0.4
2,317,859	-		MIT1002_02056	0.90	-0.1
2,317,945	+				-0.1
2,317,950	-				-2.3
2,317,957	+				-2.9
2,317,965	-				-0.3
2,317,965	-				+2.3
2,317,969	+				-0.1
2,317,988	+				+0.4
2,317,988	+				-0.5
2,318,000	+				+0.0
2,318,000	+				-0.1
2,318,000	+				-0.8
2,318,000	+				-0.2
2,318,000	+				+0.4
2,318,000	+				-0.1
2,318,000	+				-0.9
2,318,000	+				+0.4
2,318,008	-				+0.6
2,318,008	-				+1.4
2,318,008	-				+0.1
2,318,008	-				+0.6
2,318,119	-				-2.4
2,318,155	+				+1.6
2,318,155	+				+1.2
2,318,378	-				-0.4
2,318,418	+				+0.1
2,318,487	-				+0.0
2,318,512	-				+2.0
2,318,592	-				+1.6
2,318,779	+				-0.2
2,318,922	+				+0.3
2,318,922	+				-0.3
2,318,936	-				+0.2
2,318,936	-				+1.5
2,318,941	+				+1.8
2,318,949	-				-0.1
2,318,949	-				-1.9