Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01952

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
2,169,136	-				+0.4
2,169,195	-				-0.1
2,169,292	+				-1.3
2,169,303	+				+2.0
2,169,311	-				+1.4
2,169,311	-				+0.7
2,169,344	+				+1.0
2,169,383	-				-1.3
2,169,426	-				-1.0
2,169,487	+				+1.7
2,169,519	-				+1.3
2,169,553	-				+1.0
2,169,605	+				-1.2
2,169,673	-				+0.4
2,169,753	+		MIT1002_01952	0.13	-0.7
2,169,753	+		MIT1002_01952	0.13	-0.3
2,169,898	+		MIT1002_01952	0.18	-0.2
2,169,964	-		MIT1002_01952	0.20	-0.4
2,169,975	-		MIT1002_01952	0.21	+1.5
2,170,085	+		MIT1002_01952	0.24	+0.1
2,170,093	-		MIT1002_01952	0.25	-0.4
2,170,113	-		MIT1002_01952	0.25	+0.2
2,170,113	-		MIT1002_01952	0.25	+0.4
2,170,160	-		MIT1002_01952	0.27	+0.5
2,170,192	+		MIT1002_01952	0.28	-1.4
2,170,207	-		MIT1002_01952	0.29	-0.0
2,170,344	-		MIT1002_01952	0.34	-0.7
2,170,349	-		MIT1002_01952	0.34	+0.9
2,170,353	+		MIT1002_01952	0.34	-1.1
2,170,520	-		MIT1002_01952	0.40	+1.1
2,170,569	-		MIT1002_01952	0.42	+0.2
2,170,570	-		MIT1002_01952	0.42	-2.1
2,170,580	-		MIT1002_01952	0.42	+0.7
2,170,604	+		MIT1002_01952	0.43	+0.2
2,170,610	-		MIT1002_01952	0.43	-0.1
2,170,614	-		MIT1002_01952	0.43	-0.8
2,170,614	-		MIT1002_01952	0.43	+1.0
2,170,676	-		MIT1002_01952	0.45	-0.3
2,170,692	+		MIT1002_01952	0.46	-0.4
2,170,702	+		MIT1002_01952	0.46	+1.3
2,170,718	+		MIT1002_01952	0.47	-1.4
2,170,724	+		MIT1002_01952	0.47	-1.4
2,170,731	-		MIT1002_01952	0.47	-0.1
2,170,733	+		MIT1002_01952	0.47	-0.2
2,170,768	-		MIT1002_01952	0.49	+0.4
2,170,798	+		MIT1002_01952	0.50	+0.2
2,170,806	-		MIT1002_01952	0.50	-1.1
2,170,806	-		MIT1002_01952	0.50	-0.6
2,170,825	+		MIT1002_01952	0.51	+1.6
2,170,870	+		MIT1002_01952	0.52	+1.2
2,171,016	+		MIT1002_01952	0.58	-0.4
2,171,016	+		MIT1002_01952	0.58	+0.3
2,171,016	+		MIT1002_01952	0.58	-0.2
2,171,016	+		MIT1002_01952	0.58	-0.1
2,171,024	-		MIT1002_01952	0.58	+0.7
2,171,024	-		MIT1002_01952	0.58	+0.2
2,171,024	-		MIT1002_01952	0.58	+0.1
2,171,024	-		MIT1002_01952	0.58	+0.6
2,171,243	+		MIT1002_01952	0.66	+0.6
2,171,243	+		MIT1002_01952	0.66	+1.3
2,171,251	-		MIT1002_01952	0.66	+0.7
2,171,260	+		MIT1002_01952	0.66	+0.7
2,171,274	+		MIT1002_01952	0.67	-2.1
2,171,283	+		MIT1002_01952	0.67	-0.3
2,171,289	-		MIT1002_01952	0.67	-0.5
2,171,289	-		MIT1002_01952	0.67	-1.8
2,171,309	-		MIT1002_01952	0.68	+0.8
2,171,464	+		MIT1002_01952	0.73	+0.1
2,171,489	-		MIT1002_01952	0.74	+0.3
2,171,489	-		MIT1002_01952	0.74	-0.0
2,171,629	+		MIT1002_01952	0.79	-1.0
2,171,648	+		MIT1002_01952	0.80	+0.2
2,171,663	+		MIT1002_01952	0.81	-0.2
2,171,671	-		MIT1002_01952	0.81	-0.5
2,171,702	+		MIT1002_01952	0.82	-0.3
2,171,756	-		MIT1002_01952	0.84	-0.5
2,171,768	+		MIT1002_01952	0.84	+0.1
2,171,889	-		MIT1002_01952	0.89	+0.1
2,171,915	+		MIT1002_01952	0.89	-1.1
2,171,953	+				+1.0
2,171,953	+				+1.8
2,171,973	+				-0.6
2,172,096	+				+1.2
2,172,108	-				+0.3
2,172,122	+				+1.2
2,172,130	-				+0.6
2,172,137	+				+0.7
2,172,168	-				-0.6
2,172,178	+				-0.3
2,172,223	+				+0.3
2,172,223	+				-0.3
2,172,223	+				-1.3
2,172,231	-				+1.6
2,172,231	-				+0.2
2,172,231	-				+0.9
2,172,437	+				-0.1
2,172,445	-				-0.8
2,172,555	-		MIT1002_01953	0.14	+1.3
2,172,779	+		MIT1002_01953	0.29	+0.2
2,173,007	-		MIT1002_01953	0.44	+0.1
2,173,038	+		MIT1002_01953	0.46	-0.8
2,173,193	+		MIT1002_01953	0.56	+0.2
2,173,201	-		MIT1002_01953	0.56	+1.6
2,173,208	+		MIT1002_01953	0.57	+0.0