Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01803

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
2,007,898	-		MIT1002_01802	0.32	-0.7
2,007,902	+		MIT1002_01802	0.32	+0.3
2,008,145	+		MIT1002_01802	0.49	-1.5
2,008,205	-		MIT1002_01802	0.53	+1.5
2,008,210	-		MIT1002_01802	0.53	+1.1
2,008,226	+		MIT1002_01802	0.55	-1.5
2,008,282	+		MIT1002_01802	0.58	-1.5
2,008,431	+		MIT1002_01802	0.69	+1.1
2,008,495	+		MIT1002_01802	0.73	+1.0
2,008,527	-		MIT1002_01802	0.75	+0.2
2,008,583	+		MIT1002_01802	0.79	-2.7
2,008,604	+		MIT1002_01802	0.81	-0.0
2,008,612	-		MIT1002_01802	0.81	-0.3
2,008,677	-		MIT1002_01802	0.86	-0.3
2,008,678	-		MIT1002_01802	0.86	+0.5
2,008,721	+		MIT1002_01802	0.89	-0.1
2,008,723	+		MIT1002_01802	0.89	-2.2
2,008,736	-				-0.0
2,008,772	-				-0.1
2,008,784	+				+0.7
2,008,784	+				-1.6
2,008,792	-				+1.0
2,008,792	-				+1.1
2,008,844	+				+1.1
2,008,852	-				+0.7
2,008,852	-				-0.4
2,008,852	-				+0.9
2,008,919	-				+0.8
2,009,106	+		MIT1002_01803	0.33	-1.0
2,009,114	-		MIT1002_01803	0.35	+1.8
2,009,115	-		MIT1002_01803	0.35	-0.1
2,009,128	+		MIT1002_01803	0.37	+0.6
2,009,128	+		MIT1002_01803	0.37	+0.5
2,009,128	+		MIT1002_01803	0.37	+1.1
2,009,136	-		MIT1002_01803	0.38	+0.5
2,009,149	-		MIT1002_01803	0.40	+0.1
2,009,235	-		MIT1002_01803	0.52	-0.8
2,009,273	-		MIT1002_01803	0.58	+1.5
2,009,383	+		MIT1002_01803	0.74	-0.1
2,009,383	+		MIT1002_01803	0.74	+0.6
2,009,391	-		MIT1002_01803	0.75	+0.5
2,009,391	-		MIT1002_01803	0.75	+1.3
2,009,392	+		MIT1002_01803	0.75	+0.1
2,009,399	+		MIT1002_01803	0.76	+0.1
2,009,399	+		MIT1002_01803	0.76	-0.9
2,009,407	-		MIT1002_01803	0.77	+0.5
2,009,470	-		MIT1002_01803	0.87	-0.2
2,009,531	+				+0.2
2,009,539	-				+0.3
2,009,539	-				+0.8
2,009,561	-				-0.9
2,009,619	-				+1.4
2,009,625	-				-2.2
2,009,895	-				-0.3
2,010,361	+				+0.4
2,010,361	+				-0.8
2,010,361	+				-0.7
2,010,361	+				-0.6
2,010,361	+				+1.0
2,010,361	+				-0.8
2,010,369	-				+0.8
2,010,369	-				-1.8
2,010,369	-				-1.3
2,010,449	+				+0.6
2,010,485	-				+2.1
2,010,505	+				+1.3
2,010,505	+				-0.5
2,010,554	-				+0.8
2,010,554	-				-3.7