Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01759

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
1,953,476	-		MIT1002_01758	0.21	-0.8
1,953,481	-		MIT1002_01758	0.22	-0.5
1,953,561	+		MIT1002_01758	0.30	+0.0
1,953,573	+		MIT1002_01758	0.32	-0.9
1,953,578	+		MIT1002_01758	0.32	+0.5
1,953,578	+		MIT1002_01758	0.32	-0.5
1,953,594	+		MIT1002_01758	0.34	+1.8
1,953,596	-		MIT1002_01758	0.34	-0.4
1,953,596	-		MIT1002_01758	0.34	+0.6
1,953,611	-		MIT1002_01758	0.36	+0.3
1,953,672	+		MIT1002_01758	0.43	+1.1
1,953,672	+		MIT1002_01758	0.43	+0.3
1,953,677	+		MIT1002_01758	0.43	+0.4
1,953,685	-		MIT1002_01758	0.44	-0.6
1,953,690	-		MIT1002_01758	0.45	-0.5
1,953,725	-		MIT1002_01758	0.49	-0.3
1,953,815	-		MIT1002_01758	0.59	+0.6
1,953,815	-		MIT1002_01758	0.59	-0.6
1,953,852	+		MIT1002_01758	0.63	+0.1
1,953,889	+		MIT1002_01758	0.67	+1.5
1,953,949	-		MIT1002_01758	0.73	-0.2
1,953,955	+		MIT1002_01758	0.74	+0.9
1,953,955	+		MIT1002_01758	0.74	-1.6
1,953,955	+		MIT1002_01758	0.74	-0.5
1,953,955	+		MIT1002_01758	0.74	-0.2
1,953,955	+		MIT1002_01758	0.74	-0.0
1,953,963	-		MIT1002_01758	0.75	-0.3
1,953,963	-		MIT1002_01758	0.75	-0.1
1,954,005	+		MIT1002_01758	0.80	-0.1
1,954,005	+		MIT1002_01758	0.80	+0.7
1,954,005	+		MIT1002_01758	0.80	-1.5
1,954,005	+		MIT1002_01758	0.80	+0.9
1,954,015	-		MIT1002_01758	0.81	+0.1
1,954,017	+		MIT1002_01758	0.81	+0.5
1,954,053	+		MIT1002_01758	0.85	-0.6
1,954,131	-				+0.4
1,954,429	+				+0.2
1,954,454	+				+0.4
1,954,454	+				+0.2
1,954,454	+				-0.3
1,954,454	+				-0.1
1,954,512	+		MIT1002_01759	0.20	-0.4
1,954,518	+		MIT1002_01759	0.22	-0.3
1,954,520	-		MIT1002_01759	0.22	-0.3
1,954,527	+		MIT1002_01759	0.24	+1.6
1,954,572	+		MIT1002_01759	0.34	+0.2
1,954,638	+		MIT1002_01759	0.48	+0.2
1,954,765	+		MIT1002_01759	0.77	-0.7
1,954,776	+		MIT1002_01759	0.79	-0.2
1,954,865	-				-3.1
1,954,865	-				+0.6
1,954,865	-				+0.5
1,954,895	-				+0.3
1,954,901	+				-1.1
1,954,901	+				+0.4
1,954,901	+				+0.6
1,954,901	+				+0.6
1,954,906	+				+2.7
1,954,909	-				-0.5
1,954,909	-				+0.3
1,954,909	-				-0.3
1,954,909	-				+0.6
1,954,909	-				-0.4
1,954,964	+				-3.0
1,954,978	-				-0.5
1,954,980	+				-0.6
1,954,980	+				-0.3
1,954,988	-				-0.0
1,955,034	+				+0.1
1,955,075	-				+1.3
1,955,105	+				-0.5
1,955,131	-				-0.6
1,955,159	+				+0.2
1,955,171	+		MIT1002_01760	0.16	+0.1
1,955,227	-		MIT1002_01760	0.50	-0.6
1,955,256	+		MIT1002_01760	0.67	-2.3
1,955,352	-				+0.8
1,955,352	-				-2.9
1,955,359	-				+2.9
1,955,372	+				+0.5
1,955,532	+		MIT1002_01761	0.21	+0.3
1,955,532	+		MIT1002_01761	0.21	+0.9
1,955,557	+		MIT1002_01761	0.23	-1.1
1,955,599	+		MIT1002_01761	0.28	+0.5