Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01742

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
1,932,812	-		MIT1002_01740	0.79	-0.9
1,932,843	+		MIT1002_01740	0.83	+0.3
1,932,879	+		MIT1002_01740	0.88	-1.2
1,932,879	+		MIT1002_01740	0.88	-1.9
1,932,879	+		MIT1002_01740	0.88	-0.2
1,932,879	+		MIT1002_01740	0.88	-1.3
1,932,887	-		MIT1002_01740	0.89	-0.0
1,932,887	-		MIT1002_01740	0.89	+0.4
1,932,965	-				-1.7
1,932,965	-				-0.7
1,933,013	-				-0.5
1,933,040	+				+0.7
1,933,059	-				-0.6
1,933,098	+		MIT1002_01741	0.16	+0.1
1,933,190	+		MIT1002_01741	0.32	+0.9
1,933,198	-		MIT1002_01741	0.34	-1.6
1,933,379	+		MIT1002_01741	0.66	+0.7
1,933,470	-		MIT1002_01741	0.83	-1.9
1,933,541	+				+1.2
1,933,549	-				+0.2
1,933,551	+				+0.3
1,933,559	-				-1.7
1,933,574	+				+0.9
1,933,582	-				-0.3
1,933,582	-				+0.3
1,933,605	+				-0.2
1,933,615	+				-1.6
1,933,627	-				-0.2
1,933,629	+				+0.4
1,933,631	+				-1.1
1,933,639	-				+1.1
1,933,639	-				+0.3
1,933,639	-				+2.1
1,933,693	-				+0.8
1,933,802	+				+0.3
1,933,805	-				+0.3
1,933,908	+		MIT1002_01742	0.25	-0.3
1,933,939	+		MIT1002_01742	0.30	-0.1
1,933,947	-		MIT1002_01742	0.31	-1.0
1,933,954	-		MIT1002_01742	0.32	-0.1
1,934,037	+		MIT1002_01742	0.45	-0.3
1,934,042	+		MIT1002_01742	0.46	-1.4
1,934,197	+		MIT1002_01742	0.70	-0.5
1,934,197	-		MIT1002_01742	0.70	-1.1
1,934,197	-		MIT1002_01742	0.70	+0.8
1,934,205	-		MIT1002_01742	0.72	-0.5
1,934,242	+		MIT1002_01742	0.77	-0.7
1,934,250	-		MIT1002_01742	0.79	+0.9
1,934,461	-				-0.0
1,934,488	-				-0.6
1,934,500	-				-0.6
1,934,537	+				+0.3
1,934,618	+				-1.7
1,934,710	+				+0.7
1,934,710	+				+0.1
1,934,710	+				+1.1
1,934,710	+				+0.6
1,934,718	-				-0.4
1,934,718	-				+0.2
1,934,720	-				-0.2
1,934,849	+				-0.0
1,934,886	-		MIT1002_01743	0.10	-1.0
1,934,888	+		MIT1002_01743	0.10	-0.4
1,934,888	+		MIT1002_01743	0.10	+1.6
1,934,888	+		MIT1002_01743	0.10	+0.1
1,934,893	+		MIT1002_01743	0.10	+1.2
1,934,911	-		MIT1002_01743	0.11	+0.6
1,935,009	-		MIT1002_01743	0.14	-0.7
1,935,022	-		MIT1002_01743	0.15	-1.2
1,935,042	+		MIT1002_01743	0.15	-1.6
1,935,058	+		MIT1002_01743	0.16	-0.2
1,935,058	+		MIT1002_01743	0.16	-0.5
1,935,066	-		MIT1002_01743	0.16	-0.3
1,935,089	+		MIT1002_01743	0.17	+0.3
1,935,096	-		MIT1002_01743	0.17	+0.1
1,935,124	-		MIT1002_01743	0.18	+0.1
1,935,157	+		MIT1002_01743	0.19	-1.1
1,935,158	+		MIT1002_01743	0.19	-0.6
1,935,216	+		MIT1002_01743	0.21	-2.2
1,935,232	-		MIT1002_01743	0.22	-2.3
1,935,243	+		MIT1002_01743	0.22	+0.9
1,935,268	+		MIT1002_01743	0.23	-0.2
1,935,268	+		MIT1002_01743	0.23	-0.5
1,935,287	-		MIT1002_01743	0.24	-0.3
1,935,368	-		MIT1002_01743	0.26	+0.1