Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01103

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
1,210,324	+				+0.3
1,210,337	+				+0.2
1,210,383	-				-0.9
1,210,398	+				-0.4
1,210,404	+				-2.1
1,210,536	-		MIT1002_01102	0.10	-0.9
1,210,585	+		MIT1002_01102	0.16	-2.2
1,210,586	+		MIT1002_01102	0.16	+1.7
1,210,612	+		MIT1002_01102	0.19	+0.8
1,210,613	+		MIT1002_01102	0.19	+0.2
1,210,629	+		MIT1002_01102	0.21	-1.2
1,210,689	+		MIT1002_01102	0.28	-0.8
1,210,796	+		MIT1002_01102	0.40	-0.3
1,210,796	+		MIT1002_01102	0.40	-0.1
1,210,804	-		MIT1002_01102	0.41	-0.5
1,210,877	+		MIT1002_01102	0.49	-0.4
1,210,885	-		MIT1002_01102	0.50	-1.4
1,210,885	-		MIT1002_01102	0.50	+0.7
1,210,904	-		MIT1002_01102	0.53	+0.3
1,210,911	+		MIT1002_01102	0.53	-1.5
1,211,230	+				-0.8
1,211,377	-				-0.1
1,211,390	-		MIT1002_01103	0.11	+1.3
1,211,396	-		MIT1002_01103	0.12	-0.3
1,211,469	+		MIT1002_01103	0.22	-0.0
1,211,518	-		MIT1002_01103	0.28	-0.4
1,211,551	-		MIT1002_01103	0.33	-0.9
1,211,571	+		MIT1002_01103	0.36	-1.3
1,211,579	-		MIT1002_01103	0.37	-1.0
1,211,579	-		MIT1002_01103	0.37	+0.3
1,211,579	-		MIT1002_01103	0.37	-0.9
1,211,579	-		MIT1002_01103	0.37	-0.4
1,211,750	-		MIT1002_01103	0.60	+0.3
1,211,812	+		MIT1002_01103	0.68	-0.4
1,211,882	-		MIT1002_01103	0.78	-1.5
1,211,904	+		MIT1002_01103	0.81	-0.8
1,212,026	-				+0.9
1,212,084	-				-0.5
1,212,084	-				+0.1
1,212,208	+		MIT1002_01104	0.31	-1.7
1,212,277	-		MIT1002_01104	0.50	-1.4
1,212,335	+		MIT1002_01104	0.66	-0.1
1,212,388	-		MIT1002_01104	0.80	+0.5
1,212,405	+		MIT1002_01104	0.84	-1.0
1,212,418	-		MIT1002_01104	0.88	+0.7
1,212,451	+				+0.1
1,212,451	+				-0.6
1,212,555	+				+0.6
1,212,555	+				-3.6
1,212,563	-				-0.7
1,212,564	-				-1.0
1,212,566	+				-0.5
1,212,740	+		MIT1002_01105	0.32	-0.8
1,212,847	+		MIT1002_01105	0.46	+1.8
1,212,847	+		MIT1002_01105	0.46	-0.9
1,212,855	-		MIT1002_01105	0.47	+0.0
1,212,898	+		MIT1002_01105	0.53	+0.2
1,212,940	+		MIT1002_01105	0.59	-0.6
1,212,970	-		MIT1002_01105	0.63	-0.2
1,213,007	+		MIT1002_01105	0.67	-0.4
1,213,007	-		MIT1002_01105	0.67	+0.0