Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04112

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
4,613,207	+		MIT1002_04111	0.21	+1.3
4,613,215	-		MIT1002_04111	0.22	+1.0
4,613,238	+		MIT1002_04111	0.24	-0.0
4,613,238	+		MIT1002_04111	0.24	-0.4
4,613,238	+		MIT1002_04111	0.24	-0.5
4,613,238	+		MIT1002_04111	0.24	+0.9
4,613,238	+		MIT1002_04111	0.24	-1.0
4,613,246	-		MIT1002_04111	0.25	-0.6
4,613,246	-		MIT1002_04111	0.25	-0.5
4,613,246	-		MIT1002_04111	0.25	-0.3
4,613,261	-		MIT1002_04111	0.27	+0.3
4,613,261	-		MIT1002_04111	0.27	+0.4
4,613,347	-		MIT1002_04111	0.36	-0.4
4,613,405	+		MIT1002_04111	0.42	+0.4
4,613,508	-		MIT1002_04111	0.52	+1.6
4,613,567	-		MIT1002_04111	0.58	+0.5
4,613,605	+		MIT1002_04111	0.62	+0.3
4,613,618	-		MIT1002_04111	0.64	-0.5
4,613,769	-		MIT1002_04111	0.79	+1.0
4,613,834	-		MIT1002_04111	0.86	+0.1
4,613,844	+		MIT1002_04111	0.87	+1.3
4,613,846	-		MIT1002_04111	0.87	-1.7
4,613,875	+				+1.4
4,613,878	-				-0.1
4,613,978	+				+0.2
4,614,056	+				-1.3
4,614,078	+				+0.1
4,614,086	-				-1.0
4,614,086	-				+0.1
4,614,086	-				+0.5
4,614,086	-				+0.3
4,614,086	-				-0.6