Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03455

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,862,640	-		MIT1002_03454	0.41	+0.7
3,862,650	+		MIT1002_03454	0.42	-2.3
3,862,650	+		MIT1002_03454	0.42	+0.9
3,862,650	+		MIT1002_03454	0.42	+0.6
3,862,652	+		MIT1002_03454	0.42	+2.2
3,862,866	+		MIT1002_03454	0.63	-0.3
3,863,118	+		MIT1002_03454	0.86	+0.0
3,863,118	+		MIT1002_03454	0.86	+0.8
3,863,118	+		MIT1002_03454	0.86	+0.6
3,863,118	+		MIT1002_03454	0.86	-1.0
3,863,118	+		MIT1002_03454	0.86	+0.0
3,863,126	-		MIT1002_03454	0.87	+0.6
3,863,127	-		MIT1002_03454	0.87	+0.3
3,863,131	+		MIT1002_03454	0.87	-0.9
3,863,133	+		MIT1002_03454	0.88	-0.9
3,863,142	-		MIT1002_03454	0.89	-0.1
3,863,203	+				-0.6
3,863,309	+				-0.5
3,863,309	+				+0.7
3,863,309	+				+0.5
3,863,317	-				-1.7
3,863,328	-				+0.8
3,863,371	+				+0.4
3,863,430	-				-0.0
3,864,823	-				+0.2
3,864,823	-				-0.3
3,864,825	+				+1.1
3,864,825	+				+0.8
3,864,825	+				+0.5
3,864,833	-		MIT1002_03456	0.11	+0.6
3,864,833	-		MIT1002_03456	0.11	+0.4
3,864,885	+		MIT1002_03456	0.22	+1.5
3,864,919	-		MIT1002_03456	0.30	-0.5
3,864,919	-		MIT1002_03456	0.30	+0.4
3,864,919	-		MIT1002_03456	0.30	+1.2
3,864,927	-		MIT1002_03456	0.31	-0.5
3,864,995	-		MIT1002_03456	0.46	+0.3
3,865,008	+		MIT1002_03456	0.48	-0.2
3,865,008	+		MIT1002_03456	0.48	-0.1
3,865,008	+		MIT1002_03456	0.48	+0.6
3,865,016	-		MIT1002_03456	0.50	+0.3
3,865,016	-		MIT1002_03456	0.50	+0.8
3,865,083	+		MIT1002_03456	0.64	+0.5
3,865,090	+		MIT1002_03456	0.66	+0.9
3,865,091	-		MIT1002_03456	0.66	-0.1
3,865,096	-		MIT1002_03456	0.67	-0.3
3,865,178	+		MIT1002_03456	0.85	+0.6
3,865,198	-		MIT1002_03456	0.89	+0.5
3,865,231	+				+1.2
3,865,394	-		MIT1002_03457	0.19	+0.9
3,865,394	-		MIT1002_03457	0.19	+0.5
3,865,493	-		MIT1002_03457	0.31	+0.5
3,865,494	+		MIT1002_03457	0.31	+0.4
3,865,494	-		MIT1002_03457	0.31	+0.5
3,865,501	+		MIT1002_03457	0.32	-0.1
3,865,507	-		MIT1002_03457	0.33	-0.4
3,865,514	+		MIT1002_03457	0.33	-0.9
3,865,517	-		MIT1002_03457	0.34	-0.4
3,865,522	-		MIT1002_03457	0.34	+2.3
3,865,524	+		MIT1002_03457	0.35	-0.7
3,865,524	+		MIT1002_03457	0.35	+0.1
3,865,524	+		MIT1002_03457	0.35	-1.3
3,865,524	+		MIT1002_03457	0.35	+0.1
3,865,524	+		MIT1002_03457	0.35	-2.4
3,865,524	+		MIT1002_03457	0.35	-0.5
3,865,524	+		MIT1002_03457	0.35	+0.5
3,865,524	+		MIT1002_03457	0.35	+0.3
3,865,524	+		MIT1002_03457	0.35	+1.1
3,865,524	+		MIT1002_03457	0.35	+1.1
3,865,531	+		MIT1002_03457	0.35	-2.6
3,865,532	-		MIT1002_03457	0.36	+1.6
3,865,532	-		MIT1002_03457	0.36	+2.0
3,865,532	-		MIT1002_03457	0.36	-0.1
3,865,532	-		MIT1002_03457	0.36	+0.1
3,865,532	-		MIT1002_03457	0.36	-0.4
3,865,532	-		MIT1002_03457	0.36	-1.5
3,865,532	-		MIT1002_03457	0.36	+0.3
3,865,532	-		MIT1002_03457	0.36	+0.7
3,865,532	-		MIT1002_03457	0.36	+0.6
3,865,539	-		MIT1002_03457	0.36	-0.2
3,865,554	-		MIT1002_03457	0.38	+0.2
3,865,559	+		MIT1002_03457	0.39	+0.3
3,865,578	+		MIT1002_03457	0.41	+0.5
3,865,578	+		MIT1002_03457	0.41	+2.1
3,865,578	+		MIT1002_03457	0.41	-0.9
3,865,578	+		MIT1002_03457	0.41	+0.4
3,865,586	-		MIT1002_03457	0.42	+0.9
3,865,586	-		MIT1002_03457	0.42	+0.6
3,865,586	-		MIT1002_03457	0.42	-0.0
3,865,586	-		MIT1002_03457	0.42	+0.7
3,865,624	+		MIT1002_03457	0.47	-1.2
3,865,626	+		MIT1002_03457	0.47	-2.2
3,865,647	-		MIT1002_03457	0.49	+0.5
3,865,666	+		MIT1002_03457	0.52	-1.9
3,865,671	+		MIT1002_03457	0.52	+0.1
3,865,676	+		MIT1002_03457	0.53	-1.0
3,865,686	+		MIT1002_03457	0.54	-0.0