Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03418

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,820,728	-				-0.7
3,822,136	+				+1.7
3,822,225	-				+0.2
3,822,322	+		MIT1002_03419	0.15	-1.1
3,822,330	-		MIT1002_03419	0.16	+1.6
3,822,330	-		MIT1002_03419	0.16	+0.5
3,822,330	-		MIT1002_03419	0.16	+0.4
3,822,340	+		MIT1002_03419	0.17	+0.6
3,822,348	-		MIT1002_03419	0.18	-0.8
3,822,392	+		MIT1002_03419	0.23	+0.7
3,822,392	+		MIT1002_03419	0.23	+0.8
3,822,392	+		MIT1002_03419	0.23	+1.9
3,822,474	+		MIT1002_03419	0.33	-0.8
3,822,482	-		MIT1002_03419	0.34	-0.1
3,822,492	-		MIT1002_03419	0.35	+0.3
3,822,509	-		MIT1002_03419	0.37	+0.3
3,822,578	-		MIT1002_03419	0.45	-0.3
3,822,590	-		MIT1002_03419	0.47	+1.5
3,822,673	-		MIT1002_03419	0.57	-0.7
3,822,680	-		MIT1002_03419	0.58	-0.1
3,822,720	+		MIT1002_03419	0.62	+0.7
3,822,737	+		MIT1002_03419	0.64	-2.0
3,822,779	+		MIT1002_03419	0.69	+0.3
3,822,781	+		MIT1002_03419	0.70	-0.6
3,822,869	-		MIT1002_03419	0.80	-1.5
3,822,871	+		MIT1002_03419	0.80	+1.1
3,822,879	-		MIT1002_03419	0.81	-0.3
3,822,883	-		MIT1002_03419	0.82	-0.8
3,822,957	+				+0.3
3,822,984	+				+0.2
3,823,074	-				-0.8
3,823,091	-				+0.7
3,823,114	+				+0.1
3,823,141	+				+0.4