Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03383

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,785,407	+		MIT1002_03382	0.17	-0.7
3,785,415	-		MIT1002_03382	0.18	+2.2
3,785,571	-		MIT1002_03382	0.34	+0.7
3,785,578	+		MIT1002_03382	0.35	-0.0
3,785,672	+		MIT1002_03382	0.44	+0.6
3,785,688	+		MIT1002_03382	0.46	+0.2
3,785,704	+		MIT1002_03382	0.47	-0.3
3,785,765	+		MIT1002_03382	0.53	-0.2
3,785,765	+		MIT1002_03382	0.53	-0.8
3,785,765	+		MIT1002_03382	0.53	-1.0
3,785,765	+		MIT1002_03382	0.53	+1.1
3,785,765	+		MIT1002_03382	0.53	-0.7
3,785,765	+		MIT1002_03382	0.53	-0.8
3,785,765	+		MIT1002_03382	0.53	+1.5
3,785,765	+		MIT1002_03382	0.53	+0.1
3,785,773	-		MIT1002_03382	0.54	+0.0
3,785,773	-		MIT1002_03382	0.54	+0.1
3,785,773	-		MIT1002_03382	0.54	+0.3
3,785,773	-		MIT1002_03382	0.54	-1.1
3,785,773	-		MIT1002_03382	0.54	+0.9
3,785,773	-		MIT1002_03382	0.54	+0.0
3,785,773	-		MIT1002_03382	0.54	-0.5
3,785,773	-		MIT1002_03382	0.54	-0.7
3,785,773	-		MIT1002_03382	0.54	-0.1
3,785,773	-		MIT1002_03382	0.54	+0.9
3,785,775	-		MIT1002_03382	0.54	+0.7
3,785,775	-		MIT1002_03382	0.54	-0.6
3,785,794	+		MIT1002_03382	0.56	-0.7
3,785,794	+		MIT1002_03382	0.56	-0.9
3,785,802	-		MIT1002_03382	0.57	-0.1
3,785,819	-		MIT1002_03382	0.59	-0.5
3,785,824	+		MIT1002_03382	0.59	-0.4
3,785,832	-		MIT1002_03382	0.60	+0.9
3,785,881	-		MIT1002_03382	0.65	-0.5
3,785,899	+		MIT1002_03382	0.67	-0.8
3,785,907	-		MIT1002_03382	0.68	+0.6
3,785,909	+		MIT1002_03382	0.68	+1.9
3,785,916	+		MIT1002_03382	0.69	-2.9
3,785,917	-		MIT1002_03382	0.69	+0.1
3,785,917	-		MIT1002_03382	0.69	-0.0
3,785,989	-		MIT1002_03382	0.76	-0.5
3,786,012	-		MIT1002_03382	0.78	+0.2
3,786,033	-		MIT1002_03382	0.80	-0.3
3,786,119	+		MIT1002_03382	0.89	+0.5
3,786,127	-		MIT1002_03382	0.90	-1.3
3,786,136	-				-0.5
3,786,142	+				-0.7
3,786,277	-				-2.1
3,786,284	+				+0.4
3,786,386	+				-0.1
3,786,610	-		MIT1002_03383	0.63	+1.0
3,786,612	-		MIT1002_03383	0.63	+0.2
3,786,678	+		MIT1002_03383	0.82	+0.0
3,786,678	+		MIT1002_03383	0.82	+2.0
3,786,678	+		MIT1002_03383	0.82	-0.2
3,786,678	+		MIT1002_03383	0.82	+1.1
3,786,726	-				+0.3
3,786,840	-		MIT1002_03384	0.48	+0.9
3,786,840	-		MIT1002_03384	0.48	+0.3
3,786,841	-		MIT1002_03384	0.48	+0.8
3,786,845	-		MIT1002_03384	0.50	-0.6
3,786,845	-		MIT1002_03384	0.50	-0.2
3,786,894	-		MIT1002_03384	0.75	-0.1
3,786,994	+				+1.9
3,787,069	-				-0.8
3,787,118	-		MIT1002_03385	0.17	-0.0
3,787,166	-		MIT1002_03385	0.24	+0.1
3,787,166	-		MIT1002_03385	0.24	+0.7
3,787,285	+		MIT1002_03385	0.42	-0.3
3,787,297	+		MIT1002_03385	0.43	+0.6
3,787,305	-		MIT1002_03385	0.45	-0.0
3,787,310	+		MIT1002_03385	0.45	+0.5
3,787,417	-		MIT1002_03385	0.61	+1.9
3,787,473	-		MIT1002_03385	0.70	-3.6
3,787,490	+		MIT1002_03385	0.72	-0.9
3,787,492	+		MIT1002_03385	0.73	-0.2
3,787,498	-		MIT1002_03385	0.74	+0.6
3,787,508	-		MIT1002_03385	0.75	+0.9
3,787,518	+		MIT1002_03385	0.77	-0.1
3,787,535	+		MIT1002_03385	0.79	-0.8
3,787,633	-				+1.2
3,787,731	-				+0.6
3,787,740	+				-0.3