Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03334

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,724,255	-		MIT1002_03332	0.71	+1.9
3,724,315	+		MIT1002_03332	0.80	+1.9
3,724,396	-				+2.8
3,724,450	-				-0.2
3,724,507	-				+2.9
3,724,510	+				+3.2
3,724,632	+		MIT1002_03333	0.19	+0.9
3,724,642	+		MIT1002_03333	0.21	+2.5
3,724,647	+		MIT1002_03333	0.21	+1.3
3,724,650	-		MIT1002_03333	0.22	+3.0
3,724,650	-		MIT1002_03333	0.22	+2.8
3,724,655	-		MIT1002_03333	0.22	+3.3
3,724,661	+		MIT1002_03333	0.23	+3.0
3,724,662	-		MIT1002_03333	0.23	+1.9
3,724,669	-		MIT1002_03333	0.24	+2.9
3,724,669	-		MIT1002_03333	0.24	+2.2
3,724,697	+		MIT1002_03333	0.28	+1.1
3,724,697	+		MIT1002_03333	0.28	+2.5
3,724,707	+		MIT1002_03333	0.29	+2.8
3,724,712	-		MIT1002_03333	0.30	+2.1
3,724,714	+		MIT1002_03333	0.30	+2.5
3,724,749	+		MIT1002_03333	0.35	+2.2
3,724,749	+		MIT1002_03333	0.35	+1.9
3,724,757	-		MIT1002_03333	0.36	+2.9
3,724,757	-		MIT1002_03333	0.36	+2.5
3,724,783	+		MIT1002_03333	0.39	+2.3
3,724,784	+		MIT1002_03333	0.39	+3.8
3,724,792	-		MIT1002_03333	0.40	+2.8
3,724,857	+		MIT1002_03333	0.49	+2.9
3,724,943	-		MIT1002_03333	0.60	+2.5
3,724,971	+		MIT1002_03333	0.64	+2.1
3,724,977	-		MIT1002_03333	0.65	+2.1
3,725,003	-		MIT1002_03333	0.68	+2.5
3,725,043	+		MIT1002_03333	0.73	+2.6
3,725,051	-		MIT1002_03333	0.74	+2.3
3,725,051	-		MIT1002_03333	0.74	+1.4
3,725,053	+		MIT1002_03333	0.75	+1.2
3,725,074	+		MIT1002_03333	0.77	+2.4
3,725,122	+		MIT1002_03333	0.84	+2.1
3,725,179	+				+2.4
3,725,240	+				+2.6
3,725,279	+				+2.7
3,725,310	-		MIT1002_03334	0.12	+3.6
3,725,319	-		MIT1002_03334	0.14	+1.6
3,725,338	-		MIT1002_03334	0.18	+1.7
3,725,370	+		MIT1002_03334	0.25	+2.0
3,725,494	+		MIT1002_03334	0.53	+1.7
3,725,503	+		MIT1002_03334	0.55	+2.6
3,725,508	+		MIT1002_03334	0.56	+1.9
3,725,533	-		MIT1002_03334	0.61	+2.0
3,725,545	-		MIT1002_03334	0.64	-0.2
3,725,623	+		MIT1002_03334	0.81	+3.1
3,725,689	-				+1.1
3,725,729	+				+2.7
3,725,739	-				-0.0
3,725,830	-		MIT1002_03335	0.32	+0.9
3,725,843	+		MIT1002_03335	0.36	+1.8
3,725,925	+		MIT1002_03335	0.56	+0.9
3,725,925	+		MIT1002_03335	0.56	+2.7
3,725,933	-		MIT1002_03335	0.59	+0.6
3,725,933	-		MIT1002_03335	0.59	+1.6
3,725,933	-		MIT1002_03335	0.59	+2.0
3,725,933	-		MIT1002_03335	0.59	+2.0
3,725,943	+		MIT1002_03335	0.61	+2.8
3,725,943	+		MIT1002_03335	0.61	+1.1
3,725,943	+		MIT1002_03335	0.61	+1.0
3,725,943	+		MIT1002_03335	0.61	+1.3
3,726,107	-				-0.1
3,726,148	+				+3.5
3,726,197	+				+1.7
3,726,199	-				+2.0
3,726,199	-				+1.8
3,726,205	+				+2.8
3,726,263	+				+2.3
3,726,367	+		MIT1002_03336	0.15	+1.8
3,726,367	+		MIT1002_03336	0.15	+1.9
3,726,549	+		MIT1002_03336	0.28	+2.0
3,726,586	+		MIT1002_03336	0.30	+2.1
3,726,586	+		MIT1002_03336	0.30	+2.3
3,726,586	+		MIT1002_03336	0.30	+1.1
3,726,586	+		MIT1002_03336	0.30	+2.0
3,726,594	-		MIT1002_03336	0.31	+1.4
3,726,594	-		MIT1002_03336	0.31	+0.8
3,726,594	-		MIT1002_03336	0.31	+2.3
3,726,594	-		MIT1002_03336	0.31	+2.3
3,726,637	+		MIT1002_03336	0.34	+2.4