Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03332

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,722,784	+		MIT1002_03331	0.59	-3.9
3,722,787	-		MIT1002_03331	0.59	-3.8
3,723,074	+		MIT1002_03331	0.76	-2.7
3,723,121	-		MIT1002_03331	0.78	-3.2
3,723,232	-		MIT1002_03331	0.85	-3.1
3,723,237	-		MIT1002_03331	0.85	-2.8
3,723,244	+		MIT1002_03331	0.85	-4.2
3,723,262	+		MIT1002_03331	0.86	-1.2
3,723,289	-		MIT1002_03331	0.88	-3.7
3,723,396	+				-5.3
3,723,396	+				-1.7
3,723,396	+				-3.3
3,723,396	+				-4.9
3,723,465	+				-2.4
3,723,485	-				-5.7
3,723,492	-				-1.2
3,723,537	+				-4.2
3,723,545	-				-0.9
3,723,545	-				-1.1
3,723,625	+				-0.2
3,723,700	+				+1.9
3,723,703	-				+1.0
3,723,703	-				+1.5
3,723,708	-				+1.2
3,723,708	-				+2.0
3,723,710	+				+2.9
3,723,817	+				+2.2
3,723,835	-				+1.5
3,723,904	+		MIT1002_03332	0.20	+1.2
3,723,925	+		MIT1002_03332	0.23	+3.6
3,723,931	-		MIT1002_03332	0.24	+2.3
3,723,931	-		MIT1002_03332	0.24	+2.6
3,723,933	-		MIT1002_03332	0.24	+3.3
3,723,958	-		MIT1002_03332	0.28	+2.0
3,723,959	-		MIT1002_03332	0.28	+2.1
3,724,007	+		MIT1002_03332	0.35	+2.1
3,724,034	-		MIT1002_03332	0.39	+1.9
3,724,059	+		MIT1002_03332	0.42	+0.9
3,724,081	+		MIT1002_03332	0.46	+2.0
3,724,110	+		MIT1002_03332	0.50	+1.5
3,724,142	-		MIT1002_03332	0.55	+3.1
3,724,199	+		MIT1002_03332	0.63	+0.5
3,724,232	+		MIT1002_03332	0.68	-1.6
3,724,250	-		MIT1002_03332	0.71	+2.3
3,724,255	-		MIT1002_03332	0.71	+1.9
3,724,315	+		MIT1002_03332	0.80	+1.9
3,724,396	-				+2.8
3,724,450	-				-0.2
3,724,507	-				+2.9
3,724,510	+				+3.2
3,724,632	+		MIT1002_03333	0.19	+0.9
3,724,642	+		MIT1002_03333	0.21	+2.5
3,724,647	+		MIT1002_03333	0.21	+1.3
3,724,650	-		MIT1002_03333	0.22	+3.0
3,724,650	-		MIT1002_03333	0.22	+2.8
3,724,655	-		MIT1002_03333	0.22	+3.3
3,724,661	+		MIT1002_03333	0.23	+3.0
3,724,662	-		MIT1002_03333	0.23	+1.9
3,724,669	-		MIT1002_03333	0.24	+2.9
3,724,669	-		MIT1002_03333	0.24	+2.2
3,724,697	+		MIT1002_03333	0.28	+1.1
3,724,697	+		MIT1002_03333	0.28	+2.5
3,724,707	+		MIT1002_03333	0.29	+2.8
3,724,712	-		MIT1002_03333	0.30	+2.1
3,724,714	+		MIT1002_03333	0.30	+2.5
3,724,749	+		MIT1002_03333	0.35	+2.2
3,724,749	+		MIT1002_03333	0.35	+1.9
3,724,757	-		MIT1002_03333	0.36	+2.9
3,724,757	-		MIT1002_03333	0.36	+2.5
3,724,783	+		MIT1002_03333	0.39	+2.3
3,724,784	+		MIT1002_03333	0.39	+3.8
3,724,792	-		MIT1002_03333	0.40	+2.8
3,724,857	+		MIT1002_03333	0.49	+2.9
3,724,943	-		MIT1002_03333	0.60	+2.5
3,724,971	+		MIT1002_03333	0.64	+2.1
3,724,977	-		MIT1002_03333	0.65	+2.1
3,725,003	-		MIT1002_03333	0.68	+2.5
3,725,043	+		MIT1002_03333	0.73	+2.6
3,725,051	-		MIT1002_03333	0.74	+2.3
3,725,051	-		MIT1002_03333	0.74	+1.4
3,725,053	+		MIT1002_03333	0.75	+1.2
3,725,074	+		MIT1002_03333	0.77	+2.4
3,725,122	+		MIT1002_03333	0.84	+2.1
3,725,179	+				+2.4
3,725,240	+				+2.6
3,725,279	+				+2.7
3,725,310	-		MIT1002_03334	0.12	+3.6
3,725,319	-		MIT1002_03334	0.14	+1.6
3,725,338	-		MIT1002_03334	0.18	+1.7
3,725,370	+		MIT1002_03334	0.25	+2.0