Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03145

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,506,096	+				+1.2
3,506,139	+				+0.8
3,506,209	+				+0.3
3,506,217	-		MIT1002_03144	0.10	-0.7
3,506,287	+		MIT1002_03144	0.18	-1.3
3,506,295	-		MIT1002_03144	0.19	-0.5
3,506,328	-		MIT1002_03144	0.22	-0.0
3,506,352	-		MIT1002_03144	0.25	+1.0
3,506,359	+		MIT1002_03144	0.25	+0.1
3,506,374	-		MIT1002_03144	0.27	-1.2
3,506,375	-		MIT1002_03144	0.27	-0.2
3,506,425	+		MIT1002_03144	0.32	-0.1
3,506,452	-		MIT1002_03144	0.35	+0.4
3,506,502	+		MIT1002_03144	0.41	+0.8
3,506,671	+		MIT1002_03144	0.58	-1.2
3,506,679	-		MIT1002_03144	0.59	-0.9
3,506,679	-		MIT1002_03144	0.59	-0.2
3,506,679	-		MIT1002_03144	0.59	-2.4
3,506,684	+		MIT1002_03144	0.60	-1.6
3,506,725	+		MIT1002_03144	0.64	-1.1
3,506,728	-		MIT1002_03144	0.64	-1.2
3,506,826	-		MIT1002_03144	0.75	-1.5
3,506,961	+		MIT1002_03144	0.89	+0.3
3,506,972	+				+1.6
3,507,015	-				-0.4
3,507,119	-				-0.2
3,507,215	-		MIT1002_03145	0.17	-1.8
3,507,263	-		MIT1002_03145	0.22	+0.1
3,507,300	+		MIT1002_03145	0.26	-0.5
3,507,307	-		MIT1002_03145	0.27	-0.7
3,507,308	-		MIT1002_03145	0.27	-0.4
3,507,308	-		MIT1002_03145	0.27	+0.7
3,507,479	+		MIT1002_03145	0.45	+1.0
3,507,518	+		MIT1002_03145	0.49	+0.3
3,507,541	+		MIT1002_03145	0.52	+0.1
3,507,541	+		MIT1002_03145	0.52	-0.4
3,507,548	-		MIT1002_03145	0.53	-0.4
3,507,698	-		MIT1002_03145	0.69	-0.3
3,507,703	+		MIT1002_03145	0.69	-0.2
3,507,724	+		MIT1002_03145	0.72	+0.3
3,507,753	+		MIT1002_03145	0.75	-0.3
3,507,753	+		MIT1002_03145	0.75	-0.4
3,507,753	+		MIT1002_03145	0.75	-0.6
3,507,753	+		MIT1002_03145	0.75	+0.2
3,507,753	+		MIT1002_03145	0.75	+1.3
3,507,753	+		MIT1002_03145	0.75	+1.7
3,507,760	+		MIT1002_03145	0.76	-0.2
3,507,761	-		MIT1002_03145	0.76	-0.5
3,507,761	-		MIT1002_03145	0.76	-0.1
3,507,763	-		MIT1002_03145	0.76	-0.8
3,507,769	-		MIT1002_03145	0.77	+1.8
3,507,788	+		MIT1002_03145	0.79	+0.1
3,507,797	+		MIT1002_03145	0.80	-0.9
3,507,903	+				+0.2
3,507,908	+				-1.0
3,507,958	+				+1.1
3,507,966	-				+1.2
3,507,966	-				-0.5
3,508,070	-				+0.5
3,508,090	-				+0.6
3,508,156	+				+1.1
3,508,156	+				+2.2
3,508,164	-		MIT1002_03146	0.11	+0.8
3,508,164	-		MIT1002_03146	0.11	-1.8
3,508,164	-		MIT1002_03146	0.11	-0.1
3,508,188	+		MIT1002_03146	0.17	-0.9
3,508,196	-		MIT1002_03146	0.19	-1.4
3,508,222	+		MIT1002_03146	0.25	-0.1
3,508,232	-		MIT1002_03146	0.28	+0.1
3,508,479	+		MIT1002_03146	0.89	+0.4
3,508,543	+				-1.5
3,508,548	+				+0.8
3,508,548	+				-0.5
3,508,549	+				-0.9
3,508,556	-				-0.4
3,508,585	+				+1.0
3,508,602	+				-0.1
3,508,602	+				+0.3
3,508,612	-				+0.7
3,508,620	+				-1.0
3,508,719	+		MIT1002_03147	0.15	-0.9
3,508,863	-		MIT1002_03147	0.50	+0.1
3,508,903	-		MIT1002_03147	0.60	-1.3