Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03056

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,410,322	-		MIT1002_03055	0.11	-0.7
3,410,374	-		MIT1002_03055	0.16	-2.0
3,410,374	-		MIT1002_03055	0.16	-0.1
3,410,381	-		MIT1002_03055	0.17	-0.5
3,410,455	+		MIT1002_03055	0.25	-2.6
3,410,471	-		MIT1002_03055	0.27	-0.5
3,410,700	+		MIT1002_03055	0.51	-2.4
3,410,700	+		MIT1002_03055	0.51	-3.2
3,410,700	+		MIT1002_03055	0.51	-1.3
3,410,700	+		MIT1002_03055	0.51	-0.1
3,410,700	+		MIT1002_03055	0.51	+0.0
3,410,700	+		MIT1002_03055	0.51	-1.1
3,410,700	+		MIT1002_03055	0.51	-1.5
3,410,700	+		MIT1002_03055	0.51	-3.4
3,410,700	+		MIT1002_03055	0.51	+0.6
3,410,708	-		MIT1002_03055	0.51	-2.0
3,410,708	-		MIT1002_03055	0.51	-2.3
3,410,708	-		MIT1002_03055	0.51	-1.0
3,410,708	-		MIT1002_03055	0.51	-0.5
3,410,708	-		MIT1002_03055	0.51	-0.3
3,410,708	-		MIT1002_03055	0.51	-1.7
3,410,728	+		MIT1002_03055	0.54	-1.8
3,410,819	-		MIT1002_03055	0.63	-1.6
3,410,877	+		MIT1002_03055	0.69	-1.0
3,410,887	-		MIT1002_03055	0.70	-0.5
3,410,905	-		MIT1002_03055	0.72	-2.2
3,410,912	+		MIT1002_03055	0.73	-1.3
3,410,938	+		MIT1002_03055	0.76	-1.0
3,410,978	-		MIT1002_03055	0.80	-0.7
3,411,031	+		MIT1002_03055	0.85	-0.9
3,411,134	+				-2.5
3,411,144	+				+1.0
3,411,184	+				+0.3
3,411,192	-				-0.2
3,411,197	-				-1.9
3,411,202	-				-0.5
3,411,259	+				+0.0
3,411,277	-				+0.0
3,411,410	+		MIT1002_03056	0.20	+0.1
3,411,428	+		MIT1002_03056	0.23	+0.9
3,411,459	+		MIT1002_03056	0.28	-0.1
3,411,484	+		MIT1002_03056	0.33	+1.2
3,411,606	+		MIT1002_03056	0.54	-0.1
3,411,606	+		MIT1002_03056	0.54	+2.2
3,411,606	+		MIT1002_03056	0.54	-0.3
3,411,606	+		MIT1002_03056	0.54	+1.7
3,411,680	+		MIT1002_03056	0.67	-1.5
3,411,699	+		MIT1002_03056	0.71	+0.9
3,411,782	+		MIT1002_03056	0.85	-1.6
3,412,308	-				-0.5
3,412,354	-				-0.9
3,412,400	+		MIT1002_03058	0.20	-1.0
3,412,645	-				+1.0
3,412,692	-				+0.7
3,412,816	+				+0.7
3,412,818	+				+0.8
3,412,832	-				+0.5
3,412,835	+				+1.1