Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03020

Experiment: monoculture; Experiment A, time point 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMIT1002_03019 and MIT1002_03020 are separated by 215 nucleotidesMIT1002_03020 and MIT1002_03021 are separated by 108 nucleotides MIT1002_03019: MIT1002_03019 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 3,363,625 to 3,364,536 _03019 MIT1002_03020: MIT1002_03020 - Cell division protein FtsZ, at 3,364,752 to 3,365,918 _03020 MIT1002_03021: MIT1002_03021 - Cell division protein FtsA, at 3,366,027 to 3,367,256 _03021 Position (kb) 3364 3365 3366Strain fitness (log2 ratio) -2 -1 0 1at 3364.622 kb on - strandat 3364.690 kb on - strandat 3365.956 kb on - strandat 3365.956 kb on - strandat 3365.973 kb on - strandat 3365.973 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment A, time point 1
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3,364,622 - -1.0
3,364,690 - -0.6
3,365,956 - +0.1
3,365,956 - +0.6
3,365,973 - +1.3
3,365,973 - -1.8

Or see this region's nucleotide sequence