Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02977

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,313,409	+		MIT1002_02975	0.84	-0.7
3,313,409	+		MIT1002_02975	0.84	+0.7
3,313,430	+		MIT1002_02975	0.87	-0.1
3,314,747	+				+0.0
3,314,771	+				+0.5
3,314,779	-				+0.8
3,314,821	-		MIT1002_02978	0.21	-0.7
3,314,843	-		MIT1002_02978	0.28	-1.1
3,314,889	+		MIT1002_02978	0.43	+0.4
3,314,889	+		MIT1002_02978	0.43	+1.5
3,314,899	+		MIT1002_02978	0.46	-0.3
3,314,899	+		MIT1002_02978	0.46	-1.0
3,314,899	+		MIT1002_02978	0.46	-0.9
3,314,907	-		MIT1002_02978	0.49	-0.2
3,314,907	-		MIT1002_02978	0.49	-0.3
3,315,011	+		MIT1002_02978	0.83	-1.7
3,315,012	+		MIT1002_02978	0.83	-0.4
3,315,065	+				+0.3
3,315,108	-				-0.5
3,315,243	-				-2.3
3,315,382	-		MIT1002_02979	0.18	+0.1
3,315,382	-		MIT1002_02979	0.18	+0.1
3,315,427	-		MIT1002_02979	0.22	+0.4
3,315,432	-		MIT1002_02979	0.22	-0.3
3,315,511	+		MIT1002_02979	0.28	+0.8
3,315,511	+		MIT1002_02979	0.28	+1.3
3,315,525	-		MIT1002_02979	0.29	+0.1
3,315,544	-		MIT1002_02979	0.31	+1.3
3,315,586	-		MIT1002_02979	0.34	+2.5
3,315,672	+		MIT1002_02979	0.41	+0.1
3,315,687	+		MIT1002_02979	0.42	-0.2