Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02872

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,187,228	+		MIT1002_02871	0.40	+0.3
3,187,237	-		MIT1002_02871	0.41	-0.8
3,187,237	-		MIT1002_02871	0.41	+0.0
3,187,264	-		MIT1002_02871	0.43	-1.1
3,187,314	-		MIT1002_02871	0.46	-0.3
3,187,359	+		MIT1002_02871	0.50	-1.0
3,187,367	-		MIT1002_02871	0.50	-1.2
3,187,367	-		MIT1002_02871	0.50	-0.3
3,187,367	-		MIT1002_02871	0.50	-2.7
3,187,367	-		MIT1002_02871	0.50	-2.0
3,187,376	-		MIT1002_02871	0.51	-1.4
3,187,376	-		MIT1002_02871	0.51	-0.2
3,187,376	-		MIT1002_02871	0.51	+0.8
3,187,467	+		MIT1002_02871	0.57	+1.3
3,187,484	+		MIT1002_02871	0.58	+0.0
3,187,492	-		MIT1002_02871	0.59	-1.1
3,187,492	-		MIT1002_02871	0.59	+0.4
3,187,492	-		MIT1002_02871	0.59	+1.3
3,187,492	-		MIT1002_02871	0.59	+0.5
3,187,554	+		MIT1002_02871	0.63	-0.9
3,187,561	+		MIT1002_02871	0.64	+1.5
3,187,633	+		MIT1002_02871	0.69	+0.3
3,187,640	-		MIT1002_02871	0.69	-0.7
3,187,659	-		MIT1002_02871	0.71	-0.7
3,187,659	-		MIT1002_02871	0.71	+0.0
3,187,774	+		MIT1002_02871	0.79	-1.4
3,187,803	+		MIT1002_02871	0.81	-1.9
3,187,806	-		MIT1002_02871	0.81	-0.4
3,187,811	-		MIT1002_02871	0.82	-1.0
3,187,827	+		MIT1002_02871	0.83	-0.1
3,187,827	+		MIT1002_02871	0.83	-0.2
3,187,835	-		MIT1002_02871	0.83	-0.5
3,187,883	+		MIT1002_02871	0.87	-0.8
3,187,893	+		MIT1002_02871	0.87	-0.4
3,187,955	+				-0.4
3,188,005	+				+0.1
3,188,070	+				-0.0
3,188,156	+				-0.3
3,188,251	+				-1.0
3,188,259	-				+0.4
3,188,285	+		MIT1002_02872	0.10	+1.0
3,188,298	+		MIT1002_02872	0.12	-1.1
3,188,365	+		MIT1002_02872	0.23	+0.4
3,188,367	+		MIT1002_02872	0.23	-1.0
3,188,373	-		MIT1002_02872	0.24	-1.2
3,188,401	+		MIT1002_02872	0.29	-2.8
3,188,411	+		MIT1002_02872	0.30	-0.4
3,188,444	+		MIT1002_02872	0.35	-1.7
3,188,452	-		MIT1002_02872	0.37	+0.6
3,188,488	+		MIT1002_02872	0.42	-1.1
3,188,488	+		MIT1002_02872	0.42	-1.2
3,188,556	-		MIT1002_02872	0.53	-0.1
3,188,568	-		MIT1002_02872	0.55	-0.4
3,188,597	-		MIT1002_02872	0.60	+0.5
3,188,614	+		MIT1002_02872	0.62	-0.6
3,188,637	-		MIT1002_02872	0.66	-0.2
3,188,661	+		MIT1002_02872	0.70	-0.1
3,188,818	+				+1.8
3,188,914	+				-0.5
3,188,976	+				-1.1
3,189,016	+				-0.6
3,189,034	+				+0.3
3,189,034	+				-0.1
3,189,042	-		MIT1002_02873	0.10	-1.2
3,189,147	+		MIT1002_02873	0.17	-0.7
3,189,162	-		MIT1002_02873	0.18	-1.2
3,189,169	+		MIT1002_02873	0.18	+0.2
3,189,178	+		MIT1002_02873	0.19	-0.2
3,189,218	-		MIT1002_02873	0.21	+1.3
3,189,309	-		MIT1002_02873	0.27	-0.3
3,189,456	-		MIT1002_02873	0.36	+0.2
3,189,490	-		MIT1002_02873	0.39	+0.6
3,189,492	+		MIT1002_02873	0.39	-0.2
3,189,512	+		MIT1002_02873	0.40	-0.9
3,189,547	-		MIT1002_02873	0.42	+0.0
3,189,590	-		MIT1002_02873	0.45	-1.2
3,189,629	+		MIT1002_02873	0.47	+0.8
3,189,629	+		MIT1002_02873	0.47	+0.1
3,189,629	+		MIT1002_02873	0.47	-1.0
3,189,637	-		MIT1002_02873	0.48	-0.4
3,189,637	-		MIT1002_02873	0.48	-0.3
3,189,658	+		MIT1002_02873	0.49	+1.8
3,189,713	+		MIT1002_02873	0.53	-0.4
3,189,721	-		MIT1002_02873	0.53	-1.2
3,189,748	-		MIT1002_02873	0.55	-0.7
3,189,774	-		MIT1002_02873	0.57	+0.0
3,189,774	-		MIT1002_02873	0.57	+0.0
3,189,776	+		MIT1002_02873	0.57	+1.3
3,189,776	+		MIT1002_02873	0.57	-0.6
3,189,776	+		MIT1002_02873	0.57	-1.3
3,189,776	+		MIT1002_02873	0.57	-0.7
3,189,776	+		MIT1002_02873	0.57	+1.4
3,189,776	+		MIT1002_02873	0.57	-0.5
3,189,776	+		MIT1002_02873	0.57	+0.7
3,189,776	+		MIT1002_02873	0.57	+1.3
3,189,776	+		MIT1002_02873	0.57	-0.9
3,189,776	+		MIT1002_02873	0.57	-0.5
3,189,776	+		MIT1002_02873	0.57	-0.2
3,189,784	-		MIT1002_02873	0.57	-0.0
3,189,784	-		MIT1002_02873	0.57	+0.8
3,189,784	-		MIT1002_02873	0.57	+0.7
3,189,784	-		MIT1002_02873	0.57	+0.5
3,189,784	-		MIT1002_02873	0.57	-0.3
3,189,784	-		MIT1002_02873	0.57	+0.6
3,189,784	-		MIT1002_02873	0.57	+1.0
3,189,784	-		MIT1002_02873	0.57	-1.6
3,189,784	-		MIT1002_02873	0.57	-0.2
3,189,784	-		MIT1002_02873	0.57	-0.0