Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02553

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
2,846,084	+		MIT1002_02552	0.37	-0.1
2,846,100	+		MIT1002_02552	0.38	+0.2
2,846,169	+		MIT1002_02552	0.44	-0.9
2,846,175	-		MIT1002_02552	0.44	+0.8
2,846,175	-		MIT1002_02552	0.44	+0.2
2,846,177	-		MIT1002_02552	0.44	+0.3
2,846,248	+		MIT1002_02552	0.50	+2.1
2,846,256	-		MIT1002_02552	0.51	+0.2
2,846,403	+		MIT1002_02552	0.63	+1.2
2,846,403	+		MIT1002_02552	0.63	+0.2
2,846,411	-		MIT1002_02552	0.64	+0.6
2,846,440	-		MIT1002_02552	0.66	+2.1
2,846,526	-		MIT1002_02552	0.73	+0.4
2,846,536	+		MIT1002_02552	0.74	-0.6
2,846,536	+		MIT1002_02552	0.74	+0.9
2,846,584	+		MIT1002_02552	0.78	+0.1
2,846,640	-		MIT1002_02552	0.83	+0.5
2,846,741	+				-0.7
2,846,926	+				-0.2
2,846,976	-				+0.2
2,847,031	-		MIT1002_02553	0.11	+0.9
2,847,213	-		MIT1002_02553	0.30	-0.4
2,847,235	+		MIT1002_02553	0.32	-1.0
2,847,304	+		MIT1002_02553	0.39	-0.2
2,847,306	-		MIT1002_02553	0.39	-0.2
2,847,312	-		MIT1002_02553	0.40	+1.3
2,847,315	-		MIT1002_02553	0.40	+0.4
2,847,396	-		MIT1002_02553	0.49	+0.8
2,847,410	-		MIT1002_02553	0.50	-0.9
2,847,414	+		MIT1002_02553	0.51	+0.4
2,847,436	+		MIT1002_02553	0.53	+1.0
2,847,472	-		MIT1002_02553	0.57	-3.6
2,847,475	+		MIT1002_02553	0.57	+0.8
2,847,509	-		MIT1002_02553	0.61	-0.5
2,847,511	-		MIT1002_02553	0.61	-0.2
2,847,576	+		MIT1002_02553	0.68	+0.3
2,847,576	-		MIT1002_02553	0.68	+0.3
2,847,583	+		MIT1002_02553	0.68	+0.9
2,847,583	+		MIT1002_02553	0.68	+0.5
2,847,591	-		MIT1002_02553	0.69	+0.1
2,847,591	-		MIT1002_02553	0.69	-0.0
2,847,627	-		MIT1002_02553	0.73	+0.9
2,847,627	-		MIT1002_02553	0.73	-0.0
2,847,681	-		MIT1002_02553	0.79	+0.4
2,847,699	+		MIT1002_02553	0.81	+0.7
2,847,701	+		MIT1002_02553	0.81	+0.1
2,847,756	+		MIT1002_02553	0.87	-0.5
2,847,830	-				+0.4
2,847,971	-				+0.3
2,848,000	+				+1.6
2,848,008	-				-0.0
2,848,008	-				-1.8
2,848,073	+		MIT1002_02554	0.12	-0.1
2,848,083	+		MIT1002_02554	0.14	-0.5
2,848,091	-		MIT1002_02554	0.15	-0.8
2,848,091	-		MIT1002_02554	0.15	-0.4
2,848,107	+		MIT1002_02554	0.18	-1.8
2,848,160	+		MIT1002_02554	0.29	+0.2
2,848,172	-		MIT1002_02554	0.31	+0.6
2,848,237	+		MIT1002_02554	0.43	+0.3
2,848,245	-		MIT1002_02554	0.45	-0.4
2,848,259	-		MIT1002_02554	0.47	+1.5
2,848,317	-		MIT1002_02554	0.58	+0.8
2,848,324	+		MIT1002_02554	0.60	-0.1
2,848,324	-		MIT1002_02554	0.60	-0.6
2,848,332	-		MIT1002_02554	0.61	+1.2
2,848,334	-		MIT1002_02554	0.62	-0.9
2,848,396	-		MIT1002_02554	0.74	+0.6
2,848,398	-		MIT1002_02554	0.74	-0.1
2,848,411	+		MIT1002_02554	0.76	-0.5
2,848,416	+		MIT1002_02554	0.77	+1.1
2,848,416	+		MIT1002_02554	0.77	-0.1
2,848,433	+		MIT1002_02554	0.81	+0.0
2,848,433	-		MIT1002_02554	0.81	+1.2
2,848,446	+		MIT1002_02554	0.83	+0.6
2,848,482	+				+0.5
2,848,487	-				+0.2
2,848,497	+				+0.1
2,848,497	+				-2.4
2,848,521	-				-1.1
2,848,542	-				-1.4
2,848,542	-				+0.2
2,848,576	-				+0.1
2,848,578	+				-1.0
2,848,579	+				+0.0
2,848,646	+		MIT1002_02555	0.14	+1.1
2,848,654	-		MIT1002_02555	0.16	+0.4
2,848,654	-		MIT1002_02555	0.16	+0.6
2,848,654	-		MIT1002_02555	0.16	+0.3
2,848,723	+		MIT1002_02555	0.28	+0.0
2,848,838	+		MIT1002_02555	0.48	-0.5
2,848,846	-		MIT1002_02555	0.50	-0.2
2,848,864	-		MIT1002_02555	0.53	+0.6
2,848,866	+		MIT1002_02555	0.53	-0.1
2,848,874	-		MIT1002_02555	0.55	-0.8