Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02409

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
2,691,221	+				-0.6
2,691,887	-		MIT1002_02409	0.42	-1.3
2,692,720	+				+0.1
2,692,787	+				-0.7
2,692,787	+				-0.2
2,692,793	+				-0.6
2,692,795	+				-0.1
2,692,801	-				+0.1
2,692,801	-				-1.4
2,692,813	-				+0.8
2,693,013	-		MIT1002_02410	0.72	-1.0
2,693,091	-				+0.5
2,693,185	-				+0.1
2,693,196	+				+0.6
2,693,281	+		MIT1002_02411	0.27	-0.7
2,693,303	+		MIT1002_02411	0.33	+1.6
2,693,316	+		MIT1002_02411	0.36	-0.3
2,693,316	+		MIT1002_02411	0.36	+0.7
2,693,316	+		MIT1002_02411	0.36	+0.9
2,693,316	+		MIT1002_02411	0.36	-0.6
2,693,321	+		MIT1002_02411	0.37	-0.7
2,693,324	-		MIT1002_02411	0.38	-1.0
2,693,324	-		MIT1002_02411	0.38	+0.8
2,693,326	+		MIT1002_02411	0.39	-1.8
2,693,326	+		MIT1002_02411	0.39	-0.6
2,693,334	-		MIT1002_02411	0.41	-1.7
2,693,338	+		MIT1002_02411	0.42	-0.3
2,693,443	+		MIT1002_02411	0.70	-0.3
2,693,530	-				-0.3
2,693,540	-				+0.7
2,693,718	+				-1.8