Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01843

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
2,052,065	+		MIT1002_01841	0.71	-0.8
2,052,199	+				+0.2
2,052,418	+				-2.4
2,052,442	-				-0.1
2,052,463	+				+0.4
2,052,463	+				+0.9
2,052,463	+				-1.6
2,052,525	-		MIT1002_01842	0.21	+0.2
2,052,583	-		MIT1002_01842	0.31	+0.9
2,052,584	+		MIT1002_01842	0.31	-3.1
2,052,591	-		MIT1002_01842	0.33	+0.5
2,052,599	-		MIT1002_01842	0.34	+0.2
2,052,667	+		MIT1002_01842	0.46	-0.7
2,052,669	+		MIT1002_01842	0.47	-0.2
2,052,675	-		MIT1002_01842	0.48	-2.6
2,052,677	-		MIT1002_01842	0.48	-0.3
2,052,788	-		MIT1002_01842	0.68	+0.9
2,052,796	-		MIT1002_01842	0.70	-0.6
2,052,908	+				-1.7
2,052,921	-				-1.3
2,052,962	+				-0.6
2,052,969	-				+0.1
2,053,055	+				+1.2
2,053,135	+				-1.6
2,053,143	+				+0.5
2,053,151	+		MIT1002_01843	0.10	+0.4
2,053,349	-		MIT1002_01843	0.34	+0.3
2,053,349	-		MIT1002_01843	0.34	-1.7
2,053,444	-		MIT1002_01843	0.45	-0.2
2,053,447	+		MIT1002_01843	0.46	+0.6
2,053,469	-		MIT1002_01843	0.48	-1.4
2,053,497	+		MIT1002_01843	0.52	-0.2
2,053,547	-		MIT1002_01843	0.58	+0.3
2,053,600	+		MIT1002_01843	0.64	-1.0
2,053,605	+		MIT1002_01843	0.65	-0.3
2,053,615	+		MIT1002_01843	0.66	+0.5
2,053,621	-		MIT1002_01843	0.66	-0.3
2,053,696	+		MIT1002_01843	0.75	+0.7
2,053,704	-		MIT1002_01843	0.76	-0.5
2,053,740	+		MIT1002_01843	0.81	-0.1
2,053,740	+		MIT1002_01843	0.81	+0.1
2,053,745	+		MIT1002_01843	0.81	-0.5
2,053,760	+		MIT1002_01843	0.83	-0.1
2,053,763	-		MIT1002_01843	0.83	-2.3
2,053,841	+				+0.2
2,053,841	+				+0.7
2,053,841	+				+1.3
2,053,841	+				-1.6
2,053,842	-				-1.8
2,053,849	-				-0.0
2,053,975	-				-1.5
2,054,039	+				+0.7
2,054,046	-		MIT1002_01844	0.10	+0.8
2,054,075	-		MIT1002_01844	0.13	+0.0
2,054,131	+		MIT1002_01844	0.19	-1.0
2,054,131	+		MIT1002_01844	0.19	+1.6
2,054,139	-		MIT1002_01844	0.19	-1.8
2,054,139	-		MIT1002_01844	0.19	+0.1
2,054,148	+		MIT1002_01844	0.20	-1.3
2,054,205	+		MIT1002_01844	0.26	+1.1
2,054,213	-		MIT1002_01844	0.27	+0.6
2,054,225	+		MIT1002_01844	0.28	+0.0
2,054,227	+		MIT1002_01844	0.28	+0.4
2,054,233	-		MIT1002_01844	0.29	+0.5
2,054,235	-		MIT1002_01844	0.29	+0.5
2,054,329	+		MIT1002_01844	0.38	+0.2
2,054,329	+		MIT1002_01844	0.38	+0.4
2,054,345	+		MIT1002_01844	0.40	+0.3
2,054,353	-		MIT1002_01844	0.41	+1.0
2,054,384	-		MIT1002_01844	0.44	-0.0
2,054,443	+		MIT1002_01844	0.50	-2.5
2,054,444	-		MIT1002_01844	0.50	-1.1
2,054,446	-		MIT1002_01844	0.50	-0.6
2,054,575	+		MIT1002_01844	0.63	+0.1
2,054,615	+		MIT1002_01844	0.67	+0.3
2,054,665	+		MIT1002_01844	0.72	-0.6
2,054,678	+		MIT1002_01844	0.73	+0.0
2,054,686	-		MIT1002_01844	0.74	-0.2
2,054,686	-		MIT1002_01844	0.74	-0.3
2,054,686	-		MIT1002_01844	0.74	+2.2
2,054,732	-		MIT1002_01844	0.78	+0.1
2,054,867	+				+0.1
2,054,891	+				-0.4