Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01821

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
2,029,558	+				+0.2
2,029,707	+				-1.0
2,029,715	-				+0.0
2,029,732	+		MIT1002_01820	0.10	+0.2
2,029,762	-		MIT1002_01820	0.16	+0.2
2,029,780	-		MIT1002_01820	0.20	+0.6
2,029,839	+		MIT1002_01820	0.31	-0.1
2,029,844	+		MIT1002_01820	0.32	+1.4
2,029,847	-		MIT1002_01820	0.33	+0.0
2,029,987	+		MIT1002_01820	0.60	+0.6
2,030,060	+		MIT1002_01820	0.75	+0.2
2,030,188	+				+0.2
2,030,222	-				-1.5
2,030,248	+				+0.0
2,030,372	+				-0.6
2,030,707	-		MIT1002_01821	0.70	+1.0
2,030,749	+				+0.2
2,030,757	-				+0.2
2,030,757	-				-0.3
2,030,770	+				+0.3
2,030,929	+				-0.5
2,031,066	-				+0.0
2,031,153	+		MIT1002_01822	0.13	+0.4
2,031,249	+		MIT1002_01822	0.36	+0.3
2,031,420	+		MIT1002_01822	0.77	-0.3
2,031,531	+				+0.3
2,031,539	-				-0.1
2,031,560	+				+1.0
2,031,621	+		MIT1002_01823	0.13	+0.7
2,031,629	-		MIT1002_01823	0.15	-1.4
2,031,751	-		MIT1002_01823	0.41	-0.8