Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01581

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
1,739,198	+		MIT1002_01580	0.27	-0.0
1,739,237	+		MIT1002_01580	0.31	-0.6
1,739,239	+		MIT1002_01580	0.31	-2.0
1,739,239	+		MIT1002_01580	0.31	+1.3
1,739,239	+		MIT1002_01580	0.31	+0.1
1,739,239	+		MIT1002_01580	0.31	+0.2
1,739,239	+		MIT1002_01580	0.31	-0.5
1,739,239	+		MIT1002_01580	0.31	-1.3
1,739,239	+		MIT1002_01580	0.31	-0.5
1,739,239	+		MIT1002_01580	0.31	-2.0
1,739,245	-		MIT1002_01580	0.31	-0.1
1,739,247	-		MIT1002_01580	0.32	+0.2
1,739,247	-		MIT1002_01580	0.32	+0.1
1,739,247	-		MIT1002_01580	0.32	-0.4
1,739,247	-		MIT1002_01580	0.32	+0.2
1,739,247	-		MIT1002_01580	0.32	+0.1
1,739,359	+		MIT1002_01580	0.43	+0.6
1,739,384	+		MIT1002_01580	0.45	-1.7
1,739,399	+		MIT1002_01580	0.47	-0.5
1,739,399	+		MIT1002_01580	0.47	+0.2
1,739,414	+		MIT1002_01580	0.48	-0.3
1,739,427	+		MIT1002_01580	0.50	+0.5
1,739,427	+		MIT1002_01580	0.50	-0.8
1,739,427	+		MIT1002_01580	0.50	+0.2
1,739,427	+		MIT1002_01580	0.50	+2.0
1,739,435	-		MIT1002_01580	0.50	-0.8
1,739,435	-		MIT1002_01580	0.50	-0.7
1,739,435	-		MIT1002_01580	0.50	-0.7
1,739,435	-		MIT1002_01580	0.50	-1.4
1,739,437	+		MIT1002_01580	0.51	-0.3
1,739,437	+		MIT1002_01580	0.51	-1.1
1,739,437	+		MIT1002_01580	0.51	-0.6
1,739,519	+		MIT1002_01580	0.59	+0.1
1,739,610	+		MIT1002_01580	0.68	+1.2
1,739,610	-		MIT1002_01580	0.68	-0.2
1,739,618	-		MIT1002_01580	0.69	-0.8
1,739,664	-		MIT1002_01580	0.73	+0.3
1,739,674	+		MIT1002_01580	0.74	-0.3
1,739,682	-		MIT1002_01580	0.75	-0.6
1,739,723	+		MIT1002_01580	0.79	-0.4
1,739,797	+		MIT1002_01580	0.87	-0.4
1,739,805	+		MIT1002_01580	0.87	+0.4
1,739,923	-				+0.7
1,739,944	-				-1.4
1,739,944	-				-0.4
1,741,548	+				-1.4
1,741,575	+				-0.0
1,741,719	+		MIT1002_01582	0.26	-0.4
1,741,833	+		MIT1002_01582	0.57	-0.4
1,741,895	+		MIT1002_01582	0.74	+0.3
1,741,949	+		MIT1002_01582	0.89	-0.1
1,741,956	+				-0.0
1,741,973	+				-0.7
1,741,973	+				+0.2
1,741,973	+				-1.3
1,741,983	+				-0.3
1,741,983	+				+0.2
1,741,991	+				-2.2
1,741,991	-				+1.5
1,741,991	-				-0.4
1,742,008	+				+0.9
1,742,203	-				-0.4