Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01489

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
1,645,666	+				-1.5
1,645,667	+				-0.5
1,645,674	+				-1.7
1,645,674	+				+0.1
1,645,793	+		MIT1002_01487	0.30	+0.2
1,645,837	+		MIT1002_01487	0.68	+0.5
1,645,837	+		MIT1002_01487	0.68	-0.7
1,645,837	+		MIT1002_01487	0.68	-0.7
1,645,837	+		MIT1002_01487	0.68	-0.1
1,645,837	+		MIT1002_01487	0.68	-0.5
1,645,840	-		MIT1002_01487	0.70	+1.4
1,645,842	+		MIT1002_01487	0.72	-0.3
1,645,845	-		MIT1002_01487	0.74	+0.6
1,645,845	-		MIT1002_01487	0.74	+0.3
1,645,845	-		MIT1002_01487	0.74	+0.1
1,645,845	-		MIT1002_01487	0.74	-1.5
1,645,845	-		MIT1002_01487	0.74	-0.4
1,645,845	-		MIT1002_01487	0.74	+0.9
1,645,900	-				+0.2
1,645,923	-				+0.2
1,646,042	-				+0.3
1,646,063	+				+1.5
1,646,063	+				-2.5
1,646,069	+				+0.6
1,646,150	-				+0.0
1,646,166	+				+0.6
1,646,301	-				-0.2
1,646,326	+				-1.0
1,646,326	+				-0.3
1,646,326	+				+0.5
1,646,326	+				-1.5
1,646,326	+				+0.7
1,646,326	+				-1.0
1,646,326	+				+0.5
1,646,326	+				+0.2
1,646,326	+				-0.0
1,646,326	+				-0.6
1,646,334	-				+0.2
1,646,334	-				+1.0
1,646,334	-				+0.6
1,646,334	-				-1.2
1,646,334	-				+0.0
1,646,334	-				+0.4
1,646,334	-				-2.2
1,646,334	-				+0.4
1,646,394	+		MIT1002_01488	0.35	-0.6
1,646,430	+		MIT1002_01488	0.56	-0.3
1,646,430	+		MIT1002_01488	0.56	+0.9
1,646,430	+		MIT1002_01488	0.56	-0.0
1,646,430	+		MIT1002_01488	0.56	+1.8
1,646,438	-		MIT1002_01488	0.61	-0.2
1,646,438	-		MIT1002_01488	0.61	-0.2
1,646,438	-		MIT1002_01488	0.61	-0.7
1,646,438	-		MIT1002_01488	0.61	-0.2
1,646,438	-		MIT1002_01488	0.61	-0.5
1,646,438	-		MIT1002_01488	0.61	-0.4
1,646,440	+		MIT1002_01488	0.62	-2.5
1,646,440	+		MIT1002_01488	0.62	+0.1
1,646,440	+		MIT1002_01488	0.62	+0.1
1,646,440	+		MIT1002_01488	0.62	-0.7
1,646,440	-		MIT1002_01488	0.62	-0.0
1,646,448	-		MIT1002_01488	0.67	-0.5
1,646,448	-		MIT1002_01488	0.67	-0.4
1,646,538	-				-0.8
1,646,540	+				-0.5
1,646,686	+				+0.7
1,646,754	-				+1.5
1,646,816	-				-0.0
1,646,878	+				-0.0
1,646,921	+				+1.2
1,646,929	-				+0.2
1,646,944	-				+0.4
1,646,987	-				-0.6
1,646,999	-				+2.0
1,647,092	+				+0.6
1,647,184	+				+0.4
1,647,278	+				-0.4
1,647,286	-				-0.8
1,647,286	-				+0.3
1,647,286	-				+0.5
1,647,375	-		MIT1002_01490	0.11	-0.2
1,647,404	-		MIT1002_01490	0.12	+2.8
1,647,411	+		MIT1002_01490	0.12	+0.3
1,647,419	-		MIT1002_01490	0.13	+1.2
1,647,442	-		MIT1002_01490	0.13	+0.8
1,647,456	+		MIT1002_01490	0.14	-0.6
1,647,457	+		MIT1002_01490	0.14	+0.0
1,647,486	-		MIT1002_01490	0.15	-0.0
1,647,517	-		MIT1002_01490	0.16	-0.8
1,647,539	+		MIT1002_01490	0.17	+0.8
1,647,572	+		MIT1002_01490	0.19	+0.1
1,647,577	+		MIT1002_01490	0.19	-0.2
1,647,585	+		MIT1002_01490	0.19	+0.7