Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01250

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
1,374,908	+				-1.0
1,374,908	+				-0.7
1,374,916	-				+1.3
1,374,931	+				-0.7
1,374,931	+				+1.0
1,374,931	+				-0.4
1,374,931	+				+1.1
1,374,931	+				-0.3
1,374,931	+				+1.5
1,374,931	+				-0.0
1,374,931	+				+1.5
1,374,939	-				-0.7
1,374,939	-				-0.3
1,374,939	-				-0.3
1,374,939	-				-0.2
1,374,939	-				+0.6
1,374,939	-				+0.2
1,374,939	-				+1.4
1,374,939	-				+0.3
1,374,939	-				+0.3
1,374,939	-				-1.2
1,374,949	-				+0.6
1,374,949	-				-0.3
1,374,995	-				+0.1
1,374,997	+				-0.0
1,375,092	+				-2.1
1,375,092	+				-0.0
1,375,099	+		MIT1002_01248	0.11	-0.4
1,375,099	+		MIT1002_01248	0.11	+1.2
1,375,100	-		MIT1002_01248	0.12	-0.2
1,375,102	-		MIT1002_01248	0.13	+0.4
1,375,290	+				-0.2
1,375,298	-				-0.3
1,375,300	+				+0.6
1,375,308	-				+0.5
1,375,327	-				+0.4
1,375,364	+				+0.7
1,375,369	+				-0.4
1,375,372	-				+0.5
1,375,488	-		MIT1002_01249	0.18	+2.1
1,375,579	-		MIT1002_01249	0.68	+0.1
1,375,597	-		MIT1002_01249	0.78	+0.6
1,375,673	+				+0.5
1,375,689	+				+0.1
1,375,734	+				-1.7
1,375,739	+				-0.3
1,375,739	+				+0.1
1,375,762	+				-0.6
1,375,777	+				-1.0
1,375,777	+				-0.4
1,375,777	+				+1.0
1,375,777	+				+1.9
1,375,777	+				+0.2
1,375,785	-				-1.9
1,375,785	-				+0.8
1,375,872	+				+0.4
1,375,908	-				-0.2
1,375,908	-				-1.1
1,375,954	-				+0.2
1,375,991	-		MIT1002_01250	0.11	-2.1
1,376,064	+		MIT1002_01250	0.16	+0.1
1,376,064	+		MIT1002_01250	0.16	+0.9
1,376,071	+		MIT1002_01250	0.17	+0.1
1,376,173	-		MIT1002_01250	0.24	+2.4
1,376,222	-		MIT1002_01250	0.28	-0.4
1,376,234	-		MIT1002_01250	0.28	-0.7
1,376,271	+		MIT1002_01250	0.31	-0.2
1,376,283	+		MIT1002_01250	0.32	-0.2
1,376,358	-		MIT1002_01250	0.37	-1.8
1,376,358	-		MIT1002_01250	0.37	-0.1
1,376,383	+		MIT1002_01250	0.39	+0.1
1,376,385	+		MIT1002_01250	0.39	-0.5
1,376,549	+		MIT1002_01250	0.51	-0.5
1,376,602	-		MIT1002_01250	0.54	+0.2
1,376,610	-		MIT1002_01250	0.55	-1.4
1,376,637	+		MIT1002_01250	0.57	-1.5
1,376,645	-		MIT1002_01250	0.57	-0.5
1,376,719	+		MIT1002_01250	0.63	+0.5
1,376,719	+		MIT1002_01250	0.63	-0.2
1,376,725	+		MIT1002_01250	0.63	+0.4
1,376,865	+		MIT1002_01250	0.73	-0.4
1,376,880	+		MIT1002_01250	0.74	+0.6
1,376,885	+		MIT1002_01250	0.74	-0.1
1,377,044	-		MIT1002_01250	0.85	+0.0
1,377,089	-		MIT1002_01250	0.89	+1.4
1,377,247	+				+0.6
1,377,302	+				+1.4
1,377,310	-				-0.2
1,377,315	-				-0.9
1,377,357	-				+0.7
1,377,635	+		MIT1002_01251	0.26	+0.3
1,377,672	-		MIT1002_01251	0.31	+0.6
1,377,672	-		MIT1002_01251	0.31	+0.9
1,377,750	-		MIT1002_01251	0.42	-0.0
1,377,834	-		MIT1002_01251	0.54	-1.0
1,377,841	+		MIT1002_01251	0.55	+0.3
1,377,873	+		MIT1002_01251	0.59	-0.4
1,377,930	+		MIT1002_01251	0.67	-0.6
1,377,940	+		MIT1002_01251	0.68	+0.5
1,378,003	+		MIT1002_01251	0.77	+0.0
1,378,003	+		MIT1002_01251	0.77	+1.3
1,378,003	+		MIT1002_01251	0.77	+0.1
1,378,003	+		MIT1002_01251	0.77	+0.2
1,378,003	+		MIT1002_01251	0.77	-1.7
1,378,005	+		MIT1002_01251	0.77	+0.3
1,378,011	-		MIT1002_01251	0.78	+0.3
1,378,011	-		MIT1002_01251	0.78	+0.1
1,378,011	-		MIT1002_01251	0.78	-0.2
1,378,011	-		MIT1002_01251	0.78	+0.0
1,378,013	-		MIT1002_01251	0.78	-0.1