Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01140

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
1,251,026	-				+0.3
1,251,981	-				-1.4
1,253,042	-				-1.2
1,253,085	-				-2.0
1,253,085	-				-1.4
1,253,085	-				+0.2
1,253,179	-		MIT1002_01141	0.14	+1.3
1,253,184	-		MIT1002_01141	0.15	-1.7
1,253,199	-		MIT1002_01141	0.15	-0.8
1,253,199	-		MIT1002_01141	0.15	-2.2
1,253,223	-		MIT1002_01141	0.17	-0.6
1,253,250	+		MIT1002_01141	0.18	+0.5
1,253,268	-		MIT1002_01141	0.19	-3.1
1,253,268	-		MIT1002_01141	0.19	-0.4
1,253,268	-		MIT1002_01141	0.19	+1.9
1,253,319	+		MIT1002_01141	0.22	-1.5
1,253,407	-		MIT1002_01141	0.27	-1.9
1,253,539	-		MIT1002_01141	0.35	-0.3
1,253,621	-		MIT1002_01141	0.39	-2.7
1,253,760	-		MIT1002_01141	0.47	+0.0
1,253,760	-		MIT1002_01141	0.47	-1.3
1,253,778	+		MIT1002_01141	0.48	-0.7
1,253,786	-		MIT1002_01141	0.49	-1.7
1,253,786	-		MIT1002_01141	0.49	+0.1
1,253,786	-		MIT1002_01141	0.49	-2.1
1,253,820	+		MIT1002_01141	0.51	-0.4
1,253,826	-		MIT1002_01141	0.51	-0.4
1,253,826	-		MIT1002_01141	0.51	-0.4