Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00942

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
1,043,297	+				+0.8
1,043,300	-				-0.4
1,043,313	+				+0.3
1,043,321	-				-0.0
1,043,348	+				-0.3
1,044,689	+				-0.5
1,044,697	-				-0.5
1,044,776	-				+0.1
1,044,776	-				-0.6
1,044,810	-				-0.8
1,044,828	+				-0.7
1,044,869	-		MIT1002_00943	0.12	-0.9
1,045,031	+		MIT1002_00943	0.30	-0.8
1,045,042	+		MIT1002_00943	0.31	+0.8
1,045,050	-		MIT1002_00943	0.32	-1.7
1,045,073	-		MIT1002_00943	0.35	+0.0
1,045,073	-		MIT1002_00943	0.35	-0.7
1,045,073	-		MIT1002_00943	0.35	-0.1
1,045,098	+		MIT1002_00943	0.38	-0.2
1,045,106	-		MIT1002_00943	0.38	+0.3
1,045,121	+		MIT1002_00943	0.40	-0.3
1,045,121	+		MIT1002_00943	0.40	+0.1
1,045,129	-		MIT1002_00943	0.41	-2.7
1,045,141	-		MIT1002_00943	0.42	-1.1
1,045,141	-		MIT1002_00943	0.42	-0.7
1,045,149	-		MIT1002_00943	0.43	-2.3
1,045,232	-		MIT1002_00943	0.52	-0.6
1,045,257	-		MIT1002_00943	0.55	-0.7
1,045,289	-		MIT1002_00943	0.59	-0.1
1,045,327	+		MIT1002_00943	0.63	+1.0
1,045,335	-		MIT1002_00943	0.64	+0.2
1,045,335	-		MIT1002_00943	0.64	-3.0
1,045,376	-		MIT1002_00943	0.68	-0.4
1,045,376	-		MIT1002_00943	0.68	-0.2
1,045,407	+		MIT1002_00943	0.71	-1.3
1,045,407	+		MIT1002_00943	0.71	+0.6
1,045,415	-		MIT1002_00943	0.72	-2.2
1,045,478	+		MIT1002_00943	0.79	+1.5
1,045,478	+		MIT1002_00943	0.79	-0.8
1,045,478	+		MIT1002_00943	0.79	-0.2
1,045,478	+		MIT1002_00943	0.79	+1.6
1,045,478	+		MIT1002_00943	0.79	-0.7
1,045,484	+		MIT1002_00943	0.80	-0.1
1,045,486	-		MIT1002_00943	0.80	+0.6
1,045,486	-		MIT1002_00943	0.80	-0.4
1,045,486	-		MIT1002_00943	0.80	-0.3
1,045,491	-		MIT1002_00943	0.81	-0.8