Experiment: monoculture; Experiment A, time point 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MIT1002_00046 and MIT1002_00047 are separated by 256 nucleotides MIT1002_00047 and MIT1002_00048 are separated by 115 nucleotides
MIT1002_00046: MIT1002_00046 - Bacterial leucyl aminopeptidase precursor, at 51,730 to 53,337
_00046
MIT1002_00047: MIT1002_00047 - Synthetically lethal with a defective Min system protein A, at 53,594 to 54,181
_00047
MIT1002_00048: MIT1002_00048 - DNA/pantothenate metabolism flavoprotein, at 54,297 to 55,526
_00048
Position (kb) 53
54
55 Strain fitness (log2 ratio) -1
0
1
2 at 52.624 kb on - strand, within MIT1002_00046 at 52.660 kb on + strand, within MIT1002_00046 at 52.680 kb on + strand, within MIT1002_00046 at 52.749 kb on + strand, within MIT1002_00046 at 52.770 kb on - strand, within MIT1002_00046 at 52.802 kb on - strand, within MIT1002_00046 at 52.883 kb on + strand, within MIT1002_00046 at 52.883 kb on + strand, within MIT1002_00046 at 52.883 kb on + strand, within MIT1002_00046 at 52.891 kb on - strand, within MIT1002_00046 at 52.977 kb on - strand, within MIT1002_00046 at 53.017 kb on - strand, within MIT1002_00046 at 53.021 kb on + strand, within MIT1002_00046 at 53.028 kb on + strand, within MIT1002_00046 at 53.028 kb on + strand, within MIT1002_00046 at 53.028 kb on + strand, within MIT1002_00046 at 53.028 kb on + strand, within MIT1002_00046 at 53.029 kb on - strand, within MIT1002_00046 at 53.029 kb on - strand, within MIT1002_00046 at 53.029 kb on - strand, within MIT1002_00046 at 53.036 kb on - strand, within MIT1002_00046 at 53.038 kb on + strand, within MIT1002_00046 at 53.041 kb on - strand, within MIT1002_00046 at 53.052 kb on - strand, within MIT1002_00046 at 53.065 kb on + strand, within MIT1002_00046 at 53.138 kb on - strand, within MIT1002_00046 at 53.144 kb on + strand, within MIT1002_00046 at 53.144 kb on + strand, within MIT1002_00046 at 53.152 kb on - strand, within MIT1002_00046 at 53.163 kb on + strand, within MIT1002_00046 at 53.163 kb on + strand, within MIT1002_00046 at 53.163 kb on + strand, within MIT1002_00046 at 53.171 kb on - strand, within MIT1002_00046 at 53.171 kb on - strand, within MIT1002_00046 at 53.171 kb on - strand, within MIT1002_00046 at 53.171 kb on - strand, within MIT1002_00046 at 53.171 kb on - strand, within MIT1002_00046 at 53.180 kb on + strand at 53.180 kb on + strand at 53.181 kb on + strand at 53.188 kb on - strand at 53.188 kb on - strand at 53.188 kb on - strand at 53.188 kb on - strand at 53.232 kb on + strand at 53.241 kb on - strand at 53.261 kb on + strand at 53.297 kb on - strand at 53.434 kb on + strand at 53.570 kb on + strand at 53.570 kb on - strand at 54.246 kb on - strand at 54.246 kb on - strand at 54.324 kb on - strand at 54.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction monoculture; Experiment A, time point 1 remove 52,624 - MIT1002_00046 0.56 +1.3 52,660 + MIT1002_00046 0.58 -1.0 52,680 + MIT1002_00046 0.59 +0.2 52,749 + MIT1002_00046 0.63 -0.1 52,770 - MIT1002_00046 0.65 -0.4 52,802 - MIT1002_00046 0.67 +0.9 52,883 + MIT1002_00046 0.72 +0.3 52,883 + MIT1002_00046 0.72 -1.5 52,883 + MIT1002_00046 0.72 -0.1 52,891 - MIT1002_00046 0.72 -0.4 52,977 - MIT1002_00046 0.78 -0.4 53,017 - MIT1002_00046 0.80 -1.7 53,021 + MIT1002_00046 0.80 +0.6 53,028 + MIT1002_00046 0.81 +0.6 53,028 + MIT1002_00046 0.81 +0.0 53,028 + MIT1002_00046 0.81 -0.1 53,028 + MIT1002_00046 0.81 +0.2 53,029 - MIT1002_00046 0.81 +0.8 53,029 - MIT1002_00046 0.81 -0.1 53,029 - MIT1002_00046 0.81 -0.9 53,036 - MIT1002_00046 0.81 +0.4 53,038 + MIT1002_00046 0.81 +0.5 53,041 - MIT1002_00046 0.82 -0.0 53,052 - MIT1002_00046 0.82 +2.4 53,065 + MIT1002_00046 0.83 -1.2 53,138 - MIT1002_00046 0.88 +0.5 53,144 + MIT1002_00046 0.88 -0.1 53,144 + MIT1002_00046 0.88 +1.1 53,152 - MIT1002_00046 0.88 -0.6 53,163 + MIT1002_00046 0.89 -0.5 53,163 + MIT1002_00046 0.89 -0.8 53,163 + MIT1002_00046 0.89 +0.4 53,171 - MIT1002_00046 0.90 +0.2 53,171 - MIT1002_00046 0.90 -0.8 53,171 - MIT1002_00046 0.90 +0.6 53,171 - MIT1002_00046 0.90 +0.7 53,171 - MIT1002_00046 0.90 +0.3 53,180 + -0.2 53,180 + -0.2 53,181 + -0.1 53,188 - -0.3 53,188 - -0.9 53,188 - +0.3 53,188 - -0.5 53,232 + -1.2 53,241 - +1.4 53,261 + +0.1 53,297 - -0.7 53,434 + -0.4 53,570 + -1.0 53,570 - -0.6 54,246 - -1.1 54,246 - +0.1 54,324 - -0.1 54,324 - -0.3
Or see this region's nucleotide sequence