Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00009

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
10,139	-				-0.3
10,139	-				-1.3
10,311	+		MIT1002_00008	0.18	+0.9
10,312	+		MIT1002_00008	0.18	-1.0
10,348	-		MIT1002_00008	0.24	-1.1
10,365	+		MIT1002_00008	0.27	+0.8
10,373	-		MIT1002_00008	0.28	+0.3
10,373	-		MIT1002_00008	0.28	-1.1
10,413	+		MIT1002_00008	0.34	-0.5
10,424	+		MIT1002_00008	0.36	-0.1
10,424	+		MIT1002_00008	0.36	+1.5
10,424	+		MIT1002_00008	0.36	-1.0
10,469	-		MIT1002_00008	0.44	-1.5
10,469	-		MIT1002_00008	0.44	-0.9
10,618	-		MIT1002_00008	0.68	+0.7
10,618	-		MIT1002_00008	0.68	+0.2
10,626	+		MIT1002_00008	0.69	-0.3
10,635	-		MIT1002_00008	0.71	-0.6
10,645	+		MIT1002_00008	0.73	+0.4
10,658	+		MIT1002_00008	0.75	+0.3
10,666	-		MIT1002_00008	0.76	-1.3
10,666	-		MIT1002_00008	0.76	-0.6
10,678	-		MIT1002_00008	0.78	-0.8
10,736	+		MIT1002_00008	0.88	+0.1
10,737	+		MIT1002_00008	0.88	+0.0
10,745	-		MIT1002_00008	0.89	+0.9
10,757	+				-1.7
10,782	+				+0.7
10,847	+				-0.4
10,857	+				+0.2
10,973	-		MIT1002_00009	0.11	-1.9
10,983	-		MIT1002_00009	0.13	+1.1
10,991	-		MIT1002_00009	0.15	-0.7
11,053	+		MIT1002_00009	0.28	+0.3
11,081	+		MIT1002_00009	0.34	+1.3
11,088	+		MIT1002_00009	0.35	-0.3
11,089	-		MIT1002_00009	0.36	+2.0
11,089	-		MIT1002_00009	0.36	+0.1
11,089	-		MIT1002_00009	0.36	+0.9
11,090	+		MIT1002_00009	0.36	-0.8
11,096	-		MIT1002_00009	0.37	+0.3
11,187	-		MIT1002_00009	0.57	+0.3
11,220	+		MIT1002_00009	0.64	-1.3
11,232	+		MIT1002_00009	0.67	-1.0
11,240	-		MIT1002_00009	0.68	+1.0
11,240	-		MIT1002_00009	0.68	+2.0
11,276	-		MIT1002_00009	0.76	-0.7
11,363	+				-0.2
11,375	+				+0.3
11,380	+				-0.0
11,495	-		MIT1002_00010	0.18	-0.5
11,495	-		MIT1002_00010	0.18	-0.7
11,556	-		MIT1002_00010	0.30	-2.1
11,556	-		MIT1002_00010	0.30	+0.3
11,600	+		MIT1002_00010	0.39	+0.2
11,608	-		MIT1002_00010	0.40	+1.0
11,608	-		MIT1002_00010	0.40	+0.9
11,608	-		MIT1002_00010	0.40	-0.0
11,610	+		MIT1002_00010	0.41	+0.8
11,667	-		MIT1002_00010	0.52	-0.1
11,667	-		MIT1002_00010	0.52	-0.2
11,669	+		MIT1002_00010	0.52	-2.3
11,721	+		MIT1002_00010	0.63	-1.5
11,721	+		MIT1002_00010	0.63	-0.5
11,729	-		MIT1002_00010	0.64	-0.8
11,761	+		MIT1002_00010	0.71	+0.6
11,769	-		MIT1002_00010	0.72	+0.9
11,769	-		MIT1002_00010	0.72	+0.4
11,787	+		MIT1002_00010	0.76	+0.5
11,794	-		MIT1002_00010	0.77	+0.3
11,794	-		MIT1002_00010	0.77	-1.5
12,080	+				-1.4
12,107	+		MIT1002_00011	0.10	+0.1
12,273	+		MIT1002_00011	0.34	-1.7
12,273	-		MIT1002_00011	0.34	+0.2
12,275	+		MIT1002_00011	0.34	-1.8
12,284	+		MIT1002_00011	0.35	-1.5
12,289	+		MIT1002_00011	0.36	+0.7
12,292	-		MIT1002_00011	0.36	+0.5
12,297	-		MIT1002_00011	0.37	-0.3
12,325	+		MIT1002_00011	0.41	-1.9
12,338	-		MIT1002_00011	0.43	+1.2