Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05943

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
87,286	+		MPMX19_05942	0.47	-1.4
87,286	+		MPMX19_05942	0.47	-1.4
87,286	+		MPMX19_05942	0.47	+0.1
87,286	+		MPMX19_05942	0.47	+0.5
87,286	+		MPMX19_05942	0.47	-1.0
87,286	+		MPMX19_05942	0.47	-0.3
87,286	+		MPMX19_05942	0.47	-0.2
87,286	+		MPMX19_05942	0.47	+0.3
87,286	+		MPMX19_05942	0.47	+0.0
87,286	+		MPMX19_05942	0.47	-0.2
87,286	+		MPMX19_05942	0.47	+0.3
87,286	+		MPMX19_05942	0.47	-1.0
87,286	+		MPMX19_05942	0.47	+0.5
87,286	+		MPMX19_05942	0.47	-1.5
87,286	+		MPMX19_05942	0.47	-0.1
87,286	+		MPMX19_05942	0.47	+0.6
87,286	+		MPMX19_05942	0.47	-1.2
87,286	+		MPMX19_05942	0.47	-1.7
87,286	+		MPMX19_05942	0.47	+0.1
87,286	+		MPMX19_05942	0.47	+0.6
87,286	+		MPMX19_05942	0.47	+0.5
87,286	+		MPMX19_05942	0.47	-0.1
87,286	+		MPMX19_05942	0.47	-1.2
87,287	-		MPMX19_05942	0.47	+0.2
87,287	-		MPMX19_05942	0.47	+0.2
87,287	-		MPMX19_05942	0.47	-0.4
87,287	-		MPMX19_05942	0.47	-0.1
87,287	-		MPMX19_05942	0.47	-2.4
87,287	-		MPMX19_05942	0.47	+0.9
87,287	-		MPMX19_05942	0.47	-1.2
87,287	-		MPMX19_05942	0.47	+0.7
87,287	-		MPMX19_05942	0.47	-1.2
87,287	-		MPMX19_05942	0.47	-0.7
87,287	-		MPMX19_05942	0.47	-0.3
87,287	-		MPMX19_05942	0.47	-1.2
87,287	-		MPMX19_05942	0.47	+0.9
87,289	+		MPMX19_05942	0.47	+0.2
87,289	+		MPMX19_05942	0.47	-0.5
87,289	+		MPMX19_05942	0.47	-0.8
87,289	+		MPMX19_05942	0.47	-0.5
87,289	+		MPMX19_05942	0.47	-0.7
87,289	+		MPMX19_05942	0.47	-1.5
87,289	+		MPMX19_05942	0.47	+0.2
87,289	+		MPMX19_05942	0.47	-0.9
87,289	+		MPMX19_05942	0.47	-1.7
87,289	+		MPMX19_05942	0.47	+0.4
87,290	-		MPMX19_05942	0.47	-0.4
87,290	-		MPMX19_05942	0.47	+0.4
87,290	-		MPMX19_05942	0.47	-1.4
87,290	-		MPMX19_05942	0.47	-0.9
87,290	-		MPMX19_05942	0.47	+0.8
87,290	-		MPMX19_05942	0.47	-2.0
87,290	-		MPMX19_05942	0.47	-1.7
87,290	-		MPMX19_05942	0.47	+0.2
87,290	-		MPMX19_05942	0.47	+0.1
87,290	-		MPMX19_05942	0.47	+0.7
87,290	-		MPMX19_05942	0.47	+0.1
87,290	-		MPMX19_05942	0.47	-0.8
87,290	-		MPMX19_05942	0.47	+0.2
87,290	-		MPMX19_05942	0.47	-0.2
87,290	-		MPMX19_05942	0.47	+0.9
87,343	+		MPMX19_05942	0.51	-0.5
87,343	+		MPMX19_05942	0.51	+1.2
87,343	+		MPMX19_05942	0.51	-1.2
87,343	+		MPMX19_05942	0.51	-0.3
87,343	+		MPMX19_05942	0.51	-0.7
87,344	-		MPMX19_05942	0.51	-0.5
87,344	-		MPMX19_05942	0.51	-0.3
87,344	-		MPMX19_05942	0.51	-0.8
87,344	-		MPMX19_05942	0.51	-1.8
87,344	-		MPMX19_05942	0.51	+0.8
87,344	-		MPMX19_05942	0.51	+0.9
87,344	-		MPMX19_05942	0.51	+0.4
87,526	+		MPMX19_05942	0.64	+0.5
87,526	+		MPMX19_05942	0.64	-0.4
87,526	+		MPMX19_05942	0.64	-0.1
87,526	+		MPMX19_05942	0.64	-1.7
87,526	+		MPMX19_05942	0.64	-0.2
87,526	+		MPMX19_05942	0.64	-0.2
87,526	+		MPMX19_05942	0.64	+0.6
87,527	-		MPMX19_05942	0.64	+1.5
87,527	-		MPMX19_05942	0.64	-0.6
87,527	-		MPMX19_05942	0.64	-0.5
87,527	-		MPMX19_05942	0.64	-0.3
87,527	-		MPMX19_05942	0.64	-1.3
87,718	+		MPMX19_05942	0.78	+0.9
87,742	+		MPMX19_05942	0.80	+0.8
87,742	+		MPMX19_05942	0.80	-0.7
87,743	-		MPMX19_05942	0.80	-0.5
87,743	-		MPMX19_05942	0.80	+0.2
87,743	-		MPMX19_05942	0.80	+1.8
87,743	-		MPMX19_05942	0.80	+0.0
87,877	+		MPMX19_05942	0.90	-0.6
87,877	+		MPMX19_05942	0.90	-0.6
87,877	+		MPMX19_05942	0.90	-0.3
87,877	+		MPMX19_05942	0.90	+0.1
87,877	+		MPMX19_05942	0.90	-0.1
87,877	+		MPMX19_05942	0.90	-0.4
87,878	-		MPMX19_05942	0.90	+0.1
87,878	-		MPMX19_05942	0.90	+0.8
87,878	-		MPMX19_05942	0.90	-1.1
87,878	-		MPMX19_05942	0.90	+0.9
87,910	+				-0.4
87,910	+				-1.0
87,910	+				+0.8
87,910	+				-1.9
87,911	-				-1.2
87,911	-				-1.4
87,911	-				-1.8
87,917	-				-0.8
87,928	+				+0.3
87,928	+				-0.2
87,928	+				-0.5
87,928	+				+0.3
87,928	+				+1.5
87,928	+				-2.7
88,060	+				-0.5
88,060	+				-3.0
88,061	-				-0.5
88,061	-				-0.1
88,061	-				+0.2
88,061	-				+1.0
88,184	-				-0.7
88,184	-				-0.2
88,184	-				+0.1
88,192	+				-0.8
88,192	+				-0.6
88,192	+				-0.0
88,192	+				-0.2
88,192	+				+0.1
88,192	+				+0.2
88,193	-				+3.0
88,193	-				+0.4
88,193	-				-0.0
88,193	-				-0.3
88,198	+				-0.9
88,198	+				-1.8
88,198	+				-0.7
88,198	+				-0.8
88,198	+				+1.4
88,198	+				-0.0
88,199	-				+1.4
88,199	-				-1.3
88,199	-				+0.2
88,199	-				-0.6
88,217	+				-1.4
88,217	+				-1.4
88,217	+				-0.1
88,218	-				+1.1
88,228	+				-0.8
88,229	-				-0.2
88,255	-				+0.1
88,270	+		MPMX19_05943	0.10	+0.1
88,271	-		MPMX19_05943	0.10	+0.6
88,294	+		MPMX19_05943	0.13	+1.0
88,294	+		MPMX19_05943	0.13	+0.5
88,294	+		MPMX19_05943	0.13	-0.1
88,294	+		MPMX19_05943	0.13	-1.2
88,294	+		MPMX19_05943	0.13	-1.2
88,294	+		MPMX19_05943	0.13	-2.6
88,294	+		MPMX19_05943	0.13	-0.2
88,294	+		MPMX19_05943	0.13	+1.1
88,294	+		MPMX19_05943	0.13	+0.4
88,294	+		MPMX19_05943	0.13	-0.2
88,294	+		MPMX19_05943	0.13	-0.5
88,294	+		MPMX19_05943	0.13	-0.9
88,294	+		MPMX19_05943	0.13	+0.2
88,294	+		MPMX19_05943	0.13	+0.9
88,294	+		MPMX19_05943	0.13	+0.5
88,294	+		MPMX19_05943	0.13	-0.7
88,294	+		MPMX19_05943	0.13	-0.0
88,295	-		MPMX19_05943	0.13	-0.4
88,295	-		MPMX19_05943	0.13	-0.2
88,295	-		MPMX19_05943	0.13	+0.2
88,295	-		MPMX19_05943	0.13	-0.7
88,295	-		MPMX19_05943	0.13	-0.9
88,295	-		MPMX19_05943	0.13	-1.7
88,295	-		MPMX19_05943	0.13	-0.8
88,295	-		MPMX19_05943	0.13	-1.5
88,295	-		MPMX19_05943	0.13	-0.4
88,295	-		MPMX19_05943	0.13	+0.8
88,295	-		MPMX19_05943	0.13	+0.5
88,295	-		MPMX19_05943	0.13	+0.6
88,295	-		MPMX19_05943	0.13	+0.8
88,295	-		MPMX19_05943	0.13	-1.7
88,295	-		MPMX19_05943	0.13	-1.9
88,295	-		MPMX19_05943	0.13	+0.6
88,295	-		MPMX19_05943	0.13	-0.8
88,779	+		MPMX19_05943	0.69	-0.2
88,780	-		MPMX19_05943	0.69	-0.1
88,780	-		MPMX19_05943	0.69	-2.4
89,061	+				-1.2
89,103	+				-0.9
89,104	-				+0.1
89,104	-				+0.6
89,104	-				+1.2
89,104	-				-1.2
89,104	-				-0.1
89,139	-				-0.5
89,139	-				-1.3
89,489	+		MPMX19_05944	0.11	-0.5
89,489	+		MPMX19_05944	0.11	-0.7
89,489	+		MPMX19_05944	0.11	-0.9
89,489	+		MPMX19_05944	0.11	-0.9
89,489	+		MPMX19_05944	0.11	-0.8
89,504	+		MPMX19_05944	0.12	+0.5
89,504	+		MPMX19_05944	0.12	-2.4
89,504	+		MPMX19_05944	0.12	+0.2
89,504	+		MPMX19_05944	0.12	-1.2
89,504	+		MPMX19_05944	0.12	+0.2
89,504	+		MPMX19_05944	0.12	-0.5
89,504	+		MPMX19_05944	0.12	-1.0
89,504	+		MPMX19_05944	0.12	-0.4
89,504	+		MPMX19_05944	0.12	-2.5
89,504	+		MPMX19_05944	0.12	-0.3
89,504	+		MPMX19_05944	0.12	+0.4
89,504	+		MPMX19_05944	0.12	-0.2
89,504	+		MPMX19_05944	0.12	-0.6
89,504	+		MPMX19_05944	0.12	-1.2
89,504	+		MPMX19_05944	0.12	-0.2
89,504	+		MPMX19_05944	0.12	+1.0
89,504	+		MPMX19_05944	0.12	-0.7
89,505	-		MPMX19_05944	0.13	-0.2
89,505	-		MPMX19_05944	0.13	-1.2
89,505	-		MPMX19_05944	0.13	-0.8
89,505	-		MPMX19_05944	0.13	-0.5
89,505	-		MPMX19_05944	0.13	+0.2
89,505	-		MPMX19_05944	0.13	-1.7
89,505	-		MPMX19_05944	0.13	-1.5
89,505	-		MPMX19_05944	0.13	+1.1
89,528	+		MPMX19_05944	0.15	-0.7
89,528	+		MPMX19_05944	0.15	-0.0
89,528	+		MPMX19_05944	0.15	+0.0
89,528	+		MPMX19_05944	0.15	-1.4
89,528	+		MPMX19_05944	0.15	-0.5
89,528	+		MPMX19_05944	0.15	-0.7
89,528	+		MPMX19_05944	0.15	-1.4
89,528	+		MPMX19_05944	0.15	+0.1
89,528	+		MPMX19_05944	0.15	-0.7
89,529	-		MPMX19_05944	0.15	+0.3
89,529	-		MPMX19_05944	0.15	+1.3
89,529	-		MPMX19_05944	0.15	+1.2
89,529	-		MPMX19_05944	0.15	+0.2
89,529	-		MPMX19_05944	0.15	-1.5
89,529	-		MPMX19_05944	0.15	-0.5
89,529	-		MPMX19_05944	0.15	-1.5
89,529	-		MPMX19_05944	0.15	+0.8
89,663	+		MPMX19_05944	0.28	-0.3
89,663	+		MPMX19_05944	0.28	-0.9
89,663	+		MPMX19_05944	0.28	-0.5
89,663	+		MPMX19_05944	0.28	+0.2
89,663	+		MPMX19_05944	0.28	-0.6
89,664	-		MPMX19_05944	0.28	-0.0
89,664	-		MPMX19_05944	0.28	+0.2
89,664	-		MPMX19_05944	0.28	-0.0
89,861	+		MPMX19_05944	0.48	-0.7
89,861	+		MPMX19_05944	0.48	-0.2
89,861	+		MPMX19_05944	0.48	-1.0
89,861	+		MPMX19_05944	0.48	+1.8
89,861	+		MPMX19_05944	0.48	+0.1
89,861	+		MPMX19_05944	0.48	+0.8
89,861	+		MPMX19_05944	0.48	-0.2
89,861	+		MPMX19_05944	0.48	-1.0
89,861	+		MPMX19_05944	0.48	+0.5
89,861	+		MPMX19_05944	0.48	-0.5
89,861	+		MPMX19_05944	0.48	-0.3
89,861	+		MPMX19_05944	0.48	-1.1
89,861	+		MPMX19_05944	0.48	-2.7
89,861	+		MPMX19_05944	0.48	-0.7
89,862	-		MPMX19_05944	0.48	-1.5
89,862	-		MPMX19_05944	0.48	-0.1
89,862	-		MPMX19_05944	0.48	-0.4
89,862	-		MPMX19_05944	0.48	-0.5
89,862	-		MPMX19_05944	0.48	-1.4
89,862	-		MPMX19_05944	0.48	+0.5
89,862	-		MPMX19_05944	0.48	+0.4
89,862	-		MPMX19_05944	0.48	-1.7
89,862	-		MPMX19_05944	0.48	+0.1
89,862	-		MPMX19_05944	0.48	-0.2
89,862	-		MPMX19_05944	0.48	-2.5
89,862	-		MPMX19_05944	0.48	-0.0
89,862	-		MPMX19_05944	0.48	+0.7
89,862	-		MPMX19_05944	0.48	-0.0
89,862	-		MPMX19_05944	0.48	-0.1
89,862	-		MPMX19_05944	0.48	-0.5
89,862	-		MPMX19_05944	0.48	-2.3
89,862	-		MPMX19_05944	0.48	-1.0
89,862	-		MPMX19_05944	0.48	+1.1
89,870	+		MPMX19_05944	0.49	+2.5
89,870	+		MPMX19_05944	0.49	-0.6
89,871	-		MPMX19_05944	0.49	-0.0
89,984	+		MPMX19_05944	0.60	+0.8
89,984	+		MPMX19_05944	0.60	-1.6
89,985	-		MPMX19_05944	0.60	-0.5
89,985	-		MPMX19_05944	0.60	+1.0
89,985	-		MPMX19_05944	0.60	+0.4
89,985	-		MPMX19_05944	0.60	-0.2
89,985	-		MPMX19_05944	0.60	-1.4
89,985	-		MPMX19_05944	0.60	+1.8
90,038	+		MPMX19_05944	0.65	-0.0
90,038	+		MPMX19_05944	0.65	-0.1
90,038	+		MPMX19_05944	0.65	-1.2
90,038	+		MPMX19_05944	0.65	+1.4
90,038	+		MPMX19_05944	0.65	-0.5
90,038	+		MPMX19_05944	0.65	+0.7
90,038	+		MPMX19_05944	0.65	-0.4
90,038	+		MPMX19_05944	0.65	+0.8
90,038	+		MPMX19_05944	0.65	+0.2
90,038	+		MPMX19_05944	0.65	+0.2
90,038	+		MPMX19_05944	0.65	-0.4
90,039	-		MPMX19_05944	0.65	+0.2
90,039	-		MPMX19_05944	0.65	-0.8
90,039	-		MPMX19_05944	0.65	+0.2
90,039	-		MPMX19_05944	0.65	-0.1
90,039	-		MPMX19_05944	0.65	-0.3
90,039	-		MPMX19_05944	0.65	-2.2