Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04631

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
6,335	+		MPMX19_04630	0.70	+0.6
6,335	+		MPMX19_04630	0.70	+1.0
6,415	+		MPMX19_04630	0.74	-0.4
6,415	+		MPMX19_04630	0.74	+0.5
6,415	+		MPMX19_04630	0.74	-1.5
6,415	+		MPMX19_04630	0.74	-0.7
6,415	+		MPMX19_04630	0.74	-1.7
6,416	-		MPMX19_04630	0.74	-0.2
6,416	-		MPMX19_04630	0.74	-1.1
6,416	-		MPMX19_04630	0.74	-0.4
6,416	-		MPMX19_04630	0.74	-2.3
6,416	-		MPMX19_04630	0.74	+0.4
6,416	-		MPMX19_04630	0.74	-0.6
6,416	-		MPMX19_04630	0.74	-0.1
6,433	+		MPMX19_04630	0.75	+0.1
6,433	+		MPMX19_04630	0.75	+0.1
6,433	+		MPMX19_04630	0.75	-0.5
6,434	-		MPMX19_04630	0.75	+0.5
6,502	+		MPMX19_04630	0.78	-0.5
6,502	+		MPMX19_04630	0.78	-1.4
6,502	+		MPMX19_04630	0.78	-0.7
6,502	+		MPMX19_04630	0.78	-0.2
6,502	+		MPMX19_04630	0.78	-0.6
6,502	+		MPMX19_04630	0.78	-1.4
6,502	+		MPMX19_04630	0.78	+0.2
6,502	+		MPMX19_04630	0.78	-1.6
6,502	+		MPMX19_04630	0.78	-0.4
6,502	+		MPMX19_04630	0.78	-0.2
6,502	+		MPMX19_04630	0.78	-0.7
6,502	+		MPMX19_04630	0.78	+0.7
6,503	-		MPMX19_04630	0.78	-0.4
6,503	-		MPMX19_04630	0.78	+0.1
6,503	-		MPMX19_04630	0.78	+0.5
6,503	-		MPMX19_04630	0.78	-2.4
6,503	-		MPMX19_04630	0.78	+0.2
6,503	-		MPMX19_04630	0.78	-0.0
6,503	-		MPMX19_04630	0.78	-0.9
6,503	-		MPMX19_04630	0.78	+2.4
6,503	-		MPMX19_04630	0.78	+0.1
6,503	-		MPMX19_04630	0.78	-0.1
6,503	-		MPMX19_04630	0.78	+1.3
6,503	-		MPMX19_04630	0.78	+0.4
6,622	+		MPMX19_04630	0.83	+0.6
6,622	+		MPMX19_04630	0.83	-0.9
6,622	+		MPMX19_04630	0.83	-1.1
6,622	+		MPMX19_04630	0.83	-0.4
6,622	+		MPMX19_04630	0.83	-2.7
6,622	+		MPMX19_04630	0.83	-0.1
6,622	+		MPMX19_04630	0.83	+0.2
6,622	+		MPMX19_04630	0.83	+0.5
6,622	+		MPMX19_04630	0.83	-0.8
6,623	-		MPMX19_04630	0.83	+0.1
6,623	-		MPMX19_04630	0.83	-0.0
6,623	-		MPMX19_04630	0.83	+2.2
6,623	-		MPMX19_04630	0.83	-0.5
6,623	-		MPMX19_04630	0.83	-0.4
6,623	-		MPMX19_04630	0.83	+1.2
6,623	-		MPMX19_04630	0.83	+0.3
6,623	-		MPMX19_04630	0.83	-0.5
6,623	-		MPMX19_04630	0.83	-1.7
6,841	+				-0.9
7,027	+				+1.1
7,249	+				+0.9
7,249	+				-0.7
7,249	+				-0.4
7,249	+				-1.7
7,249	+				-0.7
7,250	-				+1.6
7,250	-				-0.5
7,250	-				+0.8
7,250	-				-0.1
7,250	-				-0.0
7,250	-				-0.2
7,250	-				-0.9
7,250	-				-2.3
7,250	-				-0.0
7,250	-				+1.3
7,250	-				-0.2
7,250	-				-1.3
7,250	-				+0.9
7,250	-				-2.4
7,333	+		MPMX19_04631	0.12	-1.2
7,333	+		MPMX19_04631	0.12	-1.2
7,333	+		MPMX19_04631	0.12	-0.2
7,333	+		MPMX19_04631	0.12	+0.1
7,333	+		MPMX19_04631	0.12	-0.9
7,333	+		MPMX19_04631	0.12	+1.1
7,333	+		MPMX19_04631	0.12	+0.6
7,334	-		MPMX19_04631	0.12	-0.1
7,334	-		MPMX19_04631	0.12	+0.2
7,406	+		MPMX19_04631	0.16	-1.7
7,406	+		MPMX19_04631	0.16	+0.2
7,407	-		MPMX19_04631	0.16	+0.2
7,407	-		MPMX19_04631	0.16	+0.3
7,407	-		MPMX19_04631	0.16	-0.4
7,407	-		MPMX19_04631	0.16	-0.1
7,407	-		MPMX19_04631	0.16	+0.2
7,429	+		MPMX19_04631	0.17	-0.9
7,429	+		MPMX19_04631	0.17	-0.8
7,430	-		MPMX19_04631	0.17	-0.2
7,430	-		MPMX19_04631	0.17	-0.3
7,430	-		MPMX19_04631	0.17	-0.9
7,726	+		MPMX19_04631	0.29	-1.2
7,726	+		MPMX19_04631	0.29	-0.1
7,727	-		MPMX19_04631	0.29	-0.9
8,107	+		MPMX19_04631	0.46	-1.1
8,107	+		MPMX19_04631	0.46	+1.2
8,107	+		MPMX19_04631	0.46	+0.3
8,108	-		MPMX19_04631	0.46	+0.2
8,108	-		MPMX19_04631	0.46	-0.4
8,350	+		MPMX19_04631	0.56	-1.2
8,350	+		MPMX19_04631	0.56	+0.1
8,351	-		MPMX19_04631	0.56	-1.1
8,351	-		MPMX19_04631	0.56	-0.9
8,351	-		MPMX19_04631	0.56	-2.0
8,351	-		MPMX19_04631	0.56	-0.4
8,351	-		MPMX19_04631	0.56	-0.5
8,351	-		MPMX19_04631	0.56	-1.1
8,557	+		MPMX19_04631	0.65	-0.4
8,557	+		MPMX19_04631	0.65	+0.9
8,557	+		MPMX19_04631	0.65	-1.4
8,557	+		MPMX19_04631	0.65	-0.4
8,557	+		MPMX19_04631	0.65	-0.6
8,558	-		MPMX19_04631	0.65	-1.4
8,558	-		MPMX19_04631	0.65	+0.8
8,558	-		MPMX19_04631	0.65	-0.8
8,558	-		MPMX19_04631	0.65	+0.1
8,558	-		MPMX19_04631	0.65	-0.7
8,660	-		MPMX19_04631	0.70	-1.6
9,094	+		MPMX19_04631	0.88	+0.8
9,095	-		MPMX19_04631	0.88	-0.2
9,179	-				-0.4
9,179	-				+0.6
9,311	-				+0.3
9,311	-				-0.1
9,311	-				-1.5
9,311	-				-1.2
9,341	-				-0.2
9,341	-				-1.2
9,437	+				-0.2
9,437	+				+1.6
9,438	-				-0.5
9,438	-				-0.9
9,438	-				-1.1
9,494	+				-1.2
9,524	+				+0.6
9,525	-				+0.6
9,611	+		MPMX19_04632	0.17	+1.1
9,611	+		MPMX19_04632	0.17	-0.7
9,611	+		MPMX19_04632	0.17	-1.7
9,611	+		MPMX19_04632	0.17	+0.5
9,611	+		MPMX19_04632	0.17	-1.1
9,611	+		MPMX19_04632	0.17	+1.2
9,611	+		MPMX19_04632	0.17	-0.7
9,612	-		MPMX19_04632	0.17	-1.2
9,612	-		MPMX19_04632	0.17	-1.5
9,612	-		MPMX19_04632	0.17	-2.1
9,620	+		MPMX19_04632	0.17	+0.3
9,620	+		MPMX19_04632	0.17	-0.1
9,620	+		MPMX19_04632	0.17	+0.1
9,620	+		MPMX19_04632	0.17	-0.3
9,620	+		MPMX19_04632	0.17	+0.1
9,621	-		MPMX19_04632	0.17	+0.8
9,621	-		MPMX19_04632	0.17	-0.2
9,668	+		MPMX19_04632	0.21	-0.7
9,669	-		MPMX19_04632	0.22	-0.1
9,669	-		MPMX19_04632	0.22	-0.4
9,743	+		MPMX19_04632	0.28	-1.3
9,744	-		MPMX19_04632	0.28	-1.7
9,744	-		MPMX19_04632	0.28	-0.1
9,744	-		MPMX19_04632	0.28	+0.1
9,744	-		MPMX19_04632	0.28	-0.4
9,764	+		MPMX19_04632	0.30	+0.1
9,764	+		MPMX19_04632	0.30	-0.2
9,764	+		MPMX19_04632	0.30	-0.1
9,764	+		MPMX19_04632	0.30	-2.3
9,764	+		MPMX19_04632	0.30	-1.1
9,764	+		MPMX19_04632	0.30	-0.5
9,764	+		MPMX19_04632	0.30	-0.7
9,764	+		MPMX19_04632	0.30	-0.9
9,764	+		MPMX19_04632	0.30	+0.2
9,765	-		MPMX19_04632	0.30	+1.1
9,765	-		MPMX19_04632	0.30	-0.7
9,765	-		MPMX19_04632	0.30	-0.5
9,765	-		MPMX19_04632	0.30	-1.7
9,765	-		MPMX19_04632	0.30	+0.7
9,765	-		MPMX19_04632	0.30	-0.4
9,765	-		MPMX19_04632	0.30	-0.1
9,765	-		MPMX19_04632	0.30	-1.1
9,765	-		MPMX19_04632	0.30	-0.9
9,765	-		MPMX19_04632	0.30	-1.2
9,779	+		MPMX19_04632	0.31	-0.7
9,780	-		MPMX19_04632	0.31	-2.6
9,788	+		MPMX19_04632	0.32	-0.6
9,788	+		MPMX19_04632	0.32	+1.3
9,788	+		MPMX19_04632	0.32	-1.4
9,789	-		MPMX19_04632	0.32	+1.1
9,789	-		MPMX19_04632	0.32	+0.1
9,789	-		MPMX19_04632	0.32	+0.1
9,830	+		MPMX19_04632	0.35	-1.5
9,830	+		MPMX19_04632	0.35	-0.5
9,830	+		MPMX19_04632	0.35	-0.9
9,830	+		MPMX19_04632	0.35	-0.9
9,830	+		MPMX19_04632	0.35	+0.8
9,830	+		MPMX19_04632	0.35	-0.9
9,831	+		MPMX19_04632	0.35	-0.6
9,831	-		MPMX19_04632	0.35	+0.2
9,831	-		MPMX19_04632	0.35	-0.2
9,831	-		MPMX19_04632	0.35	-0.1
9,831	-		MPMX19_04632	0.35	-0.8
9,831	-		MPMX19_04632	0.35	-0.6
9,831	-		MPMX19_04632	0.35	-1.8
9,932	+		MPMX19_04632	0.44	-0.9
9,932	+		MPMX19_04632	0.44	-0.9
9,932	+		MPMX19_04632	0.44	-0.2
9,933	-		MPMX19_04632	0.44	-0.5
10,025	+		MPMX19_04632	0.52	+0.0
10,025	+		MPMX19_04632	0.52	+0.1
10,025	+		MPMX19_04632	0.52	+0.2
10,025	+		MPMX19_04632	0.52	-0.4
10,025	+		MPMX19_04632	0.52	-0.5
10,026	-		MPMX19_04632	0.52	-0.4
10,026	-		MPMX19_04632	0.52	-1.2
10,026	-		MPMX19_04632	0.52	+0.2
10,026	-		MPMX19_04632	0.52	-0.8
10,026	-		MPMX19_04632	0.52	-1.0
10,026	-		MPMX19_04632	0.52	-0.1
10,026	-		MPMX19_04632	0.52	-1.2
10,052	+		MPMX19_04632	0.54	-0.9
10,052	+		MPMX19_04632	0.54	-1.3
10,053	-		MPMX19_04632	0.54	-0.1
10,053	-		MPMX19_04632	0.54	+0.5
10,053	-		MPMX19_04632	0.54	-0.2
10,208	+		MPMX19_04632	0.68	+0.6
10,208	+		MPMX19_04632	0.68	+0.2
10,208	+		MPMX19_04632	0.68	-0.1
10,208	+		MPMX19_04632	0.68	+0.2
10,208	+		MPMX19_04632	0.68	-0.1
10,208	+		MPMX19_04632	0.68	+0.2
10,208	+		MPMX19_04632	0.68	-0.5
10,208	+		MPMX19_04632	0.68	+0.1
10,208	+		MPMX19_04632	0.68	-0.9
10,208	+		MPMX19_04632	0.68	-0.2
10,208	+		MPMX19_04632	0.68	-0.7
10,208	+		MPMX19_04632	0.68	+0.6
10,208	+		MPMX19_04632	0.68	+1.3
10,209	-		MPMX19_04632	0.68	-0.1
10,209	-		MPMX19_04632	0.68	-0.1