Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03744

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,184,930	+		MPMX19_03742	0.59	-1.5
1,184,930	+		MPMX19_03742	0.59	-0.0
1,184,930	+		MPMX19_03742	0.59	-0.1
1,184,930	+		MPMX19_03742	0.59	-0.7
1,184,930	+		MPMX19_03742	0.59	-0.8
1,184,930	+		MPMX19_03742	0.59	+0.6
1,184,930	+		MPMX19_03742	0.59	-2.5
1,184,930	+		MPMX19_03742	0.59	-1.5
1,184,930	+		MPMX19_03742	0.59	-1.9
1,184,930	+		MPMX19_03742	0.59	+0.8
1,184,930	+		MPMX19_03742	0.59	-0.5
1,184,930	+		MPMX19_03742	0.59	+0.1
1,184,930	+		MPMX19_03742	0.59	-0.2
1,184,930	+		MPMX19_03742	0.59	-0.0
1,184,930	+		MPMX19_03742	0.59	-0.3
1,184,930	+		MPMX19_03742	0.59	+0.1
1,184,931	-		MPMX19_03742	0.59	+0.0
1,184,931	-		MPMX19_03742	0.59	-1.5
1,184,931	-		MPMX19_03742	0.59	-0.5
1,184,931	-		MPMX19_03742	0.59	-0.0
1,184,931	-		MPMX19_03742	0.59	+1.7
1,184,931	-		MPMX19_03742	0.59	-0.3
1,184,931	-		MPMX19_03742	0.59	+1.3
1,184,931	-		MPMX19_03742	0.59	+0.3
1,184,931	-		MPMX19_03742	0.59	-0.5
1,184,931	-		MPMX19_03742	0.59	-0.2
1,184,931	-		MPMX19_03742	0.59	+0.2
1,184,931	-		MPMX19_03742	0.59	-1.1
1,185,138	+				+0.1
1,185,138	+				-1.5
1,185,138	+				-1.1
1,185,138	+				-0.1
1,185,138	+				-0.3
1,185,139	-				-0.3
1,185,139	-				+0.5
1,185,139	-				+0.3
1,185,139	-				+1.3
1,185,139	-				+0.7
1,185,139	-				+0.4
1,185,261	+				-0.8
1,185,261	+				-1.2
1,185,262	-				-0.1
1,185,262	-				-1.1
1,185,262	-				+0.4
1,185,263	+				-0.8
1,185,263	+				-0.4
1,185,263	+				-0.5
1,185,274	+				-1.5
1,185,274	+				-0.2
1,185,274	+				+1.7
1,185,275	-				-0.5
1,185,275	-				+0.4
1,185,275	-				+1.3
1,185,275	-				-0.8
1,185,276	+				-0.9
1,185,276	+				-0.0
1,185,276	+				-0.4
1,185,276	+				-1.5
1,185,277	-				-0.6
1,185,277	-				-0.9
1,185,277	-				-0.9
1,185,277	-				-0.3
1,185,277	-				+0.3
1,185,277	-				-1.8
1,185,307	+				-0.3
1,185,307	+				-0.3
1,185,307	+				-0.9
1,185,307	+				+0.5
1,185,307	+				-0.0
1,185,307	+				-1.4
1,185,307	+				-0.1
1,185,307	+				+1.0
1,185,307	+				-0.6
1,185,307	+				-1.0
1,185,307	+				+0.7
1,185,307	+				+0.1
1,185,308	-				-0.3
1,185,308	-				+0.9
1,185,308	-				-0.6
1,185,308	-				+0.2
1,185,308	-				-1.3
1,185,308	-				+0.5
1,185,308	-				-0.9
1,185,308	-				-0.6
1,185,308	-				-0.5
1,185,308	-				-0.2
1,185,308	-				+0.1
1,185,308	-				-0.0
1,185,308	-				-0.1
1,185,308	-				-0.1
1,185,308	-				-0.1
1,185,308	-				+0.0
1,185,309	+				-0.9
1,185,309	+				-0.1
1,185,309	+				-0.5
1,185,309	+				-1.1
1,185,309	+				-0.6
1,185,310	-				-0.5
1,185,310	-				+0.7
1,185,310	-				+1.2
1,185,310	-				-1.9
1,185,310	-				+0.5
1,185,625	+				+0.1
1,185,625	+				-1.3
1,185,625	+				-1.3
1,185,625	+				+0.7
1,185,625	+				-2.4
1,185,625	+				-2.1
1,185,625	+				-1.1
1,185,625	+				-1.8
1,185,625	+				+0.3
1,185,625	+				-0.0
1,185,625	+				+0.2
1,185,625	+				-0.1
1,185,625	+				-0.7
1,185,626	-				-1.5
1,185,626	-				+0.5
1,185,626	-				-0.6
1,185,626	-				-1.1
1,185,626	-				+0.5
1,185,626	-				+0.2
1,185,626	-				+1.2
1,185,626	-				-0.6
1,185,626	-				+1.2
1,185,626	-				-1.8
1,185,626	-				-1.6
1,185,626	-				-0.4
1,185,626	-				-0.1
1,185,626	-				-0.6
1,185,626	-				+1.7
1,185,626	-				-0.8
1,185,626	-				-1.0
1,185,626	-				+2.3
1,185,626	-				-1.5
1,185,626	-				+0.5
1,185,626	-				+0.1
1,185,626	-				-0.2
1,185,626	-				-0.5
1,185,627	+				-1.0
1,185,627	+				+0.5
1,185,627	+				-0.8
1,185,627	+				-1.1
1,185,627	+				-0.5
1,185,627	+				-0.0
1,185,627	+				-1.5
1,185,627	+				+0.3
1,185,627	+				-1.0
1,185,627	+				-0.5
1,185,627	+				+0.1
1,185,627	+				+0.1
1,185,627	+				-1.6
1,185,627	+				+0.1
1,185,627	+				-0.6
1,185,627	+				-0.9
1,185,628	-				-0.1
1,185,628	-				+0.4
1,185,628	-				-1.1
1,185,628	-				-0.8
1,185,628	-				+1.1
1,185,628	-				-1.7
1,185,628	-				-0.5
1,185,628	-				-1.5
1,185,628	-				-0.8
1,185,628	-				-0.2
1,185,628	-				-0.5
1,185,628	-				+0.3
1,185,628	-				-0.6
1,185,628	-				-2.0
1,185,628	-				-0.2
1,185,628	-				-0.8
1,185,628	-				-0.5
1,185,628	-				-0.7
1,185,628	-				+0.4
1,185,628	-				+0.9
1,185,628	-				-0.2
1,185,628	-				-1.3
1,185,628	-				+0.5
1,185,629	+				+1.4
1,185,629	+				-0.3
1,185,629	+				-0.9
1,185,629	+				-1.8
1,185,629	+				-1.5
1,185,629	+				+0.5
1,185,629	+				-0.1
1,185,629	+				-1.5
1,185,629	+				-1.1
1,185,629	+				-1.1
1,185,629	+				+0.5
1,185,629	+				-0.2
1,185,629	+				-0.0
1,185,629	+				-0.5
1,185,629	+				-0.3
1,185,629	+				-0.3
1,185,629	+				-0.7
1,185,629	+				+0.5
1,185,629	+				+0.4
1,185,630	-				-1.3
1,185,630	-				-0.6
1,185,630	-				+0.2
1,185,630	-				-0.2
1,185,630	-				-0.2
1,185,630	-				-1.5
1,185,630	-				-0.4
1,185,630	-				+0.1
1,185,630	-				-0.4
1,185,630	-				+0.3
1,185,630	-				+0.4
1,185,630	-				-0.6
1,185,630	-				+0.4
1,185,630	-				-0.1
1,185,630	-				-1.6
1,185,630	-				+0.7
1,185,630	-				-0.1
1,185,630	-				-1.1
1,185,630	-				-1.6
1,185,630	-				-1.5
1,185,630	-				+0.5
1,185,630	-				-1.1
1,185,630	-				+0.6
1,185,630	-				-0.4
1,185,630	-				-1.7
1,185,630	-				-0.1
1,185,630	-				-2.1
1,185,630	-				-0.5
1,185,630	-				+0.3
1,185,639	-				-0.3
1,185,639	-				-1.0
1,185,639	-				+0.9
1,185,639	-				+0.0
1,185,639	-				-2.6
1,185,641	-				+1.3
1,185,641	-				-0.4
1,185,641	-				-2.5
1,185,672	+				+0.7
1,185,672	+				+0.1
1,185,672	+				-0.3
1,185,672	+				-1.5
1,185,673	-				+0.8
1,185,673	-				+0.5
1,185,673	-				+1.0
1,185,674	+				-1.5
1,185,674	+				-0.7
1,185,674	+				+0.7
1,185,675	-				-1.3
1,185,815	+				-0.3
1,185,815	+				-0.5
1,185,815	+				+1.7
1,185,815	+				-0.1
1,185,816	-				-0.1
1,185,816	-				-0.5
1,185,816	-				+0.0
1,185,816	-				-0.9
1,185,816	-				-1.1
1,185,867	+		MPMX19_03744	0.13	+0.1
1,185,867	+		MPMX19_03744	0.13	-1.0
1,185,867	+		MPMX19_03744	0.13	+0.3
1,185,867	+		MPMX19_03744	0.13	-0.9
1,185,867	+		MPMX19_03744	0.13	+0.3
1,185,868	-		MPMX19_03744	0.14	+0.9
1,185,868	-		MPMX19_03744	0.14	+0.5
1,185,868	-		MPMX19_03744	0.14	+0.6
1,185,907	-		MPMX19_03744	0.58	+0.2
1,185,907	-		MPMX19_03744	0.58	-1.1
1,185,907	-		MPMX19_03744	0.58	-0.5
1,185,915	+		MPMX19_03744	0.67	-2.4
1,185,915	+		MPMX19_03744	0.67	-0.5
1,185,915	+		MPMX19_03744	0.67	-0.5
1,185,916	-		MPMX19_03744	0.68	-0.0
1,185,916	-		MPMX19_03744	0.68	-0.3
1,185,916	-		MPMX19_03744	0.68	+0.1
1,185,916	-		MPMX19_03744	0.68	-1.9
1,185,916	-		MPMX19_03744	0.68	+1.4
1,186,105	+				-0.2
1,186,106	-				-2.6
1,186,106	-				-0.3
1,186,153	+		MPMX19_03745	0.11	-1.1
1,186,153	+		MPMX19_03745	0.11	-1.3
1,186,153	+		MPMX19_03745	0.11	+0.4
1,186,153	+		MPMX19_03745	0.11	-0.2
1,186,154	-		MPMX19_03745	0.11	-0.7
1,186,154	-		MPMX19_03745	0.11	+1.0
1,186,160	+		MPMX19_03745	0.12	-1.0
1,186,201	+		MPMX19_03745	0.14	+0.2
1,186,201	+		MPMX19_03745	0.14	-0.6
1,186,201	+		MPMX19_03745	0.14	+0.8
1,186,202	-		MPMX19_03745	0.14	-0.2
1,186,202	-		MPMX19_03745	0.14	-1.3
1,186,202	-		MPMX19_03745	0.14	-0.5
1,186,202	-		MPMX19_03745	0.14	-2.6
1,186,321	+		MPMX19_03745	0.21	-1.1
1,186,321	+		MPMX19_03745	0.21	+0.1
1,186,321	+		MPMX19_03745	0.21	-0.5
1,186,322	-		MPMX19_03745	0.21	-0.3
1,186,322	-		MPMX19_03745	0.21	+0.4
1,186,381	+		MPMX19_03745	0.25	-0.7
1,186,381	+		MPMX19_03745	0.25	+0.1
1,186,381	+		MPMX19_03745	0.25	-0.5
1,186,381	+		MPMX19_03745	0.25	-0.2
1,186,382	-		MPMX19_03745	0.25	+0.5
1,186,382	-		MPMX19_03745	0.25	-0.6
1,186,382	-		MPMX19_03745	0.25	-0.2
1,186,382	-		MPMX19_03745	0.25	+0.5
1,186,382	-		MPMX19_03745	0.25	+0.7
1,186,382	-		MPMX19_03745	0.25	-0.7
1,186,495	+		MPMX19_03745	0.31	-0.6
1,186,495	+		MPMX19_03745	0.31	-0.1
1,186,495	+		MPMX19_03745	0.31	-0.7
1,186,495	+		MPMX19_03745	0.31	+0.3
1,186,495	+		MPMX19_03745	0.31	+0.8
1,186,495	+		MPMX19_03745	0.31	+0.2
1,186,495	+		MPMX19_03745	0.31	+1.9
1,186,495	+		MPMX19_03745	0.31	+1.2
1,186,495	+		MPMX19_03745	0.31	-1.1
1,186,495	+		MPMX19_03745	0.31	+0.4
1,186,495	+		MPMX19_03745	0.31	+0.1
1,186,495	+		MPMX19_03745	0.31	+1.4
1,186,495	+		MPMX19_03745	0.31	+0.7
1,186,495	+		MPMX19_03745	0.31	+0.5
1,186,495	+		MPMX19_03745	0.31	-0.4
1,186,495	+		MPMX19_03745	0.31	+1.1
1,186,495	+		MPMX19_03745	0.31	-3.4
1,186,495	+		MPMX19_03745	0.31	+0.3
1,186,495	+		MPMX19_03745	0.31	+0.2
1,186,495	+		MPMX19_03745	0.31	-0.8
1,186,496	-		MPMX19_03745	0.31	-0.3
1,186,496	-		MPMX19_03745	0.31	+1.0
1,186,496	-		MPMX19_03745	0.31	-0.8
1,186,496	-		MPMX19_03745	0.31	-0.0
1,186,496	-		MPMX19_03745	0.31	+0.2
1,186,496	-		MPMX19_03745	0.31	-0.1
1,186,496	-		MPMX19_03745	0.31	-1.0
1,186,496	-		MPMX19_03745	0.31	-0.2
1,186,496	-		MPMX19_03745	0.31	-0.4