Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03712

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,151,405	-		MPMX19_03711	0.40	-1.5
1,151,405	-		MPMX19_03711	0.40	-0.6
1,151,557	+		MPMX19_03711	0.50	-1.8
1,151,557	+		MPMX19_03711	0.50	+0.9
1,151,557	+		MPMX19_03711	0.50	+0.6
1,151,557	+		MPMX19_03711	0.50	+0.2
1,151,557	+		MPMX19_03711	0.50	-1.5
1,151,557	+		MPMX19_03711	0.50	-1.8
1,151,557	+		MPMX19_03711	0.50	-0.7
1,151,557	+		MPMX19_03711	0.50	-0.4
1,151,558	-		MPMX19_03711	0.50	-0.3
1,151,558	-		MPMX19_03711	0.50	-1.1
1,151,558	-		MPMX19_03711	0.50	+0.5
1,151,558	-		MPMX19_03711	0.50	-0.6
1,151,558	-		MPMX19_03711	0.50	-0.3
1,151,558	-		MPMX19_03711	0.50	-1.4
1,151,558	-		MPMX19_03711	0.50	-2.1
1,151,560	+		MPMX19_03711	0.50	-0.3
1,151,560	+		MPMX19_03711	0.50	-2.1
1,151,561	-		MPMX19_03711	0.50	-0.3
1,151,575	+		MPMX19_03711	0.51	-0.8
1,151,575	+		MPMX19_03711	0.51	+0.7
1,151,575	+		MPMX19_03711	0.51	+0.3
1,151,575	+		MPMX19_03711	0.51	-1.2
1,151,576	-		MPMX19_03711	0.51	-0.3
1,151,576	-		MPMX19_03711	0.51	-0.0
1,151,695	+		MPMX19_03711	0.59	+0.1
1,151,695	+		MPMX19_03711	0.59	-0.8
1,151,695	+		MPMX19_03711	0.59	-0.2
1,151,695	+		MPMX19_03711	0.59	-0.1
1,151,695	+		MPMX19_03711	0.59	-0.2
1,151,696	-		MPMX19_03711	0.59	-0.8
1,151,696	-		MPMX19_03711	0.59	+0.7
1,151,711	-		MPMX19_03711	0.60	+1.1
1,151,926	+		MPMX19_03711	0.74	+0.4
1,151,926	+		MPMX19_03711	0.74	-0.8
1,151,926	+		MPMX19_03711	0.74	-1.5
1,151,926	+		MPMX19_03711	0.74	-1.1
1,151,926	+		MPMX19_03711	0.74	-0.8
1,152,017	-		MPMX19_03711	0.79	+0.5
1,152,017	-		MPMX19_03711	0.79	-0.4
1,152,017	-		MPMX19_03711	0.79	-0.6
1,152,017	-		MPMX19_03711	0.79	+0.5
1,152,017	-		MPMX19_03711	0.79	-0.3
1,152,256	+				-0.4
1,152,256	+				-0.4
1,152,256	+				-0.2
1,152,256	+				-1.0
1,152,256	+				-0.7
1,152,256	+				-1.1
1,152,256	+				-1.8
1,152,256	+				-1.1
1,152,256	+				-1.6
1,152,256	+				-1.3
1,152,256	+				-1.8
1,152,256	+				-1.0
1,152,256	+				-0.8
1,152,256	+				-0.1
1,152,256	+				-0.9
1,152,256	+				+0.5
1,152,256	+				+0.5
1,152,256	+				+0.8
1,152,256	+				-1.5
1,152,256	+				-1.5
1,152,256	+				+0.0
1,152,256	+				+0.4
1,152,256	+				-1.0
1,152,256	+				-1.1
1,152,256	+				-1.8
1,152,256	+				-0.2
1,152,256	+				-0.4
1,152,256	+				-0.6
1,152,256	+				-0.5
1,152,256	+				-0.5
1,152,256	+				-0.4
1,152,257	-				-0.2
1,152,257	-				-0.3
1,152,257	-				-1.4
1,152,257	-				-0.4
1,152,257	-				-0.5
1,152,257	-				-2.2
1,152,257	-				+0.9
1,152,257	-				+1.3
1,152,257	-				-1.8
1,152,257	-				-0.4
1,152,257	-				-1.5
1,152,257	-				-0.1
1,152,257	-				+0.1
1,152,257	-				-0.3
1,152,257	-				+0.1
1,152,257	-				+0.4
1,152,257	-				-0.7
1,152,257	-				-1.0
1,152,257	-				-1.6
1,152,257	-				-0.8
1,152,257	-				-0.8
1,152,257	-				+0.1
1,152,257	-				+0.8
1,152,257	-				-0.9
1,152,257	-				+0.7
1,152,257	-				-0.4
1,152,257	-				+0.3
1,152,257	-				-0.8
1,152,257	-				-0.4
1,152,257	-				-0.9
1,152,257	-				+1.1
1,152,258	+				-0.2
1,152,258	+				-0.4
1,152,259	-				-2.1
1,152,259	-				-1.1
1,152,259	-				-0.8
1,152,259	-				-0.0
1,152,259	-				-0.9
1,152,259	-				-0.0
1,152,259	-				+0.7
1,152,259	-				+0.4
1,152,259	-				-0.2
1,152,259	-				-0.3
1,152,259	-				-0.1
1,152,259	-				-1.3
1,152,259	-				+1.4
1,152,331	+				+0.7
1,152,331	+				-1.5
1,152,332	-				+1.0
1,152,332	-				+0.3
1,152,332	-				-1.8
1,152,332	-				+1.0
1,152,605	+		MPMX19_03712	0.22	+0.7
1,152,869	+		MPMX19_03712	0.48	+0.7
1,152,869	+		MPMX19_03712	0.48	+0.5
1,152,869	+		MPMX19_03712	0.48	-1.5
1,152,870	-		MPMX19_03712	0.48	+1.1
1,152,870	-		MPMX19_03712	0.48	+0.1
1,153,073	+		MPMX19_03712	0.69	+0.2
1,153,073	+		MPMX19_03712	0.69	-0.7
1,153,073	+		MPMX19_03712	0.69	-2.4
1,153,073	+		MPMX19_03712	0.69	+0.5
1,153,073	+		MPMX19_03712	0.69	-0.1
1,153,073	+		MPMX19_03712	0.69	+0.9
1,153,073	+		MPMX19_03712	0.69	+0.3
1,153,073	+		MPMX19_03712	0.69	-0.7
1,153,073	+		MPMX19_03712	0.69	-0.3
1,153,073	+		MPMX19_03712	0.69	-1.1
1,153,073	+		MPMX19_03712	0.69	-0.6
1,153,073	+		MPMX19_03712	0.69	+0.1
1,153,073	+		MPMX19_03712	0.69	-0.7
1,153,073	+		MPMX19_03712	0.69	-0.4
1,153,073	+		MPMX19_03712	0.69	-0.0
1,153,074	-		MPMX19_03712	0.69	+0.6
1,153,074	-		MPMX19_03712	0.69	-0.2
1,153,074	-		MPMX19_03712	0.69	+1.0
1,153,074	-		MPMX19_03712	0.69	+0.6
1,153,074	-		MPMX19_03712	0.69	+1.7
1,153,074	-		MPMX19_03712	0.69	-0.3
1,153,074	-		MPMX19_03712	0.69	-0.6
1,153,094	+		MPMX19_03712	0.71	-1.2
1,153,094	+		MPMX19_03712	0.71	-0.2
1,153,094	+		MPMX19_03712	0.71	+1.2
1,153,095	-		MPMX19_03712	0.71	+2.0
1,153,109	+		MPMX19_03712	0.73	-0.2
1,153,109	+		MPMX19_03712	0.73	-0.5
1,153,110	-		MPMX19_03712	0.73	-2.0
1,153,110	-		MPMX19_03712	0.73	-1.2
1,153,129	+		MPMX19_03712	0.75	+0.1
1,153,129	+		MPMX19_03712	0.75	-1.1
1,153,129	+		MPMX19_03712	0.75	+0.5
1,153,130	-		MPMX19_03712	0.75	+0.2
1,153,130	-		MPMX19_03712	0.75	-0.3
1,153,148	+		MPMX19_03712	0.76	-1.4
1,153,172	+		MPMX19_03712	0.79	-1.8
1,153,172	+		MPMX19_03712	0.79	-0.0
1,153,173	-		MPMX19_03712	0.79	-0.1
1,153,173	-		MPMX19_03712	0.79	-1.3
1,153,500	+				-0.4
1,153,500	+				-1.9
1,153,500	+				+0.7
1,153,500	+				+0.5
1,153,500	+				+0.5
1,153,500	+				-1.6
1,153,501	-				+0.5
1,153,501	-				-0.2
1,153,501	-				+0.0
1,153,501	-				-0.9
1,153,501	-				+1.7
1,153,501	-				+1.7
1,153,501	-				-0.8
1,153,501	-				-0.6
1,153,501	-				-1.4
1,153,650	+				+1.2
1,153,650	+				-0.6
1,153,650	+				-1.7
1,153,650	+				-0.4
1,153,650	+				+0.4
1,153,650	+				+1.5
1,153,650	+				-2.1
1,153,650	+				-2.8
1,153,651	-				+0.3
1,153,651	-				-0.1
1,153,651	-				-0.5
1,153,651	-				-0.3
1,153,669	+				+0.5
1,153,734	+				+0.3
1,153,735	-				+0.1
1,153,761	+				-0.8
1,153,761	+				-2.2
1,153,761	+				-0.7
1,153,761	+				+0.6
1,153,761	+				-0.0
1,153,762	-				+0.0
1,153,762	-				-0.6
1,153,804	+				+1.0
1,153,804	+				+1.4
1,153,804	+				+0.4
1,153,804	+				+0.7
1,153,804	+				-0.6
1,153,804	+				+1.0
1,153,805	-				+0.7
1,153,805	-				-0.6
1,153,805	-				-1.8
1,153,806	+				-2.2
1,153,806	+				+0.4
1,153,806	+				-0.5
1,153,806	+				-0.0
1,153,806	+				-0.6
1,153,806	+				+0.1
1,153,806	+				-1.4
1,153,806	+				-0.3
1,153,806	+				-0.4
1,153,806	+				-1.3
1,153,806	+				-0.2
1,153,806	+				-1.2
1,153,806	+				-0.6
1,153,806	+				+1.7
1,153,806	+				-0.8
1,153,806	+				-0.4
1,153,806	+				+0.1
1,153,806	+				-1.3
1,153,806	+				+1.5
1,153,806	+				-1.8
1,153,807	-				-1.0
1,153,807	-				-0.5
1,153,807	-				+0.8
1,153,807	-				-0.9
1,153,807	-				-0.7
1,153,807	-				-0.7
1,153,807	-				-0.8
1,153,807	-				+0.2
1,153,807	-				+0.0
1,153,807	-				+0.8
1,153,807	-				+1.0
1,153,807	-				-0.7
1,153,807	-				-1.1
1,153,807	-				+0.6
1,153,807	-				-0.3
1,153,807	-				-0.3
1,153,807	-				-0.9
1,153,872	+		MPMX19_03713	0.14	-0.4
1,153,872	+		MPMX19_03713	0.14	+1.2
1,153,872	+		MPMX19_03713	0.14	-0.8
1,153,872	+		MPMX19_03713	0.14	-0.5
1,153,872	+		MPMX19_03713	0.14	+0.4
1,153,872	+		MPMX19_03713	0.14	-0.3
1,153,872	+		MPMX19_03713	0.14	-0.7
1,153,872	+		MPMX19_03713	0.14	-1.5
1,153,872	+		MPMX19_03713	0.14	-1.4
1,153,872	+		MPMX19_03713	0.14	+1.7
1,153,872	+		MPMX19_03713	0.14	-0.5
1,153,872	+		MPMX19_03713	0.14	+1.7
1,153,872	+		MPMX19_03713	0.14	-0.6
1,153,872	+		MPMX19_03713	0.14	+1.3
1,153,872	+		MPMX19_03713	0.14	+1.0
1,153,872	+		MPMX19_03713	0.14	-1.5
1,153,872	+		MPMX19_03713	0.14	-0.3
1,153,872	+		MPMX19_03713	0.14	-1.4
1,153,872	+		MPMX19_03713	0.14	+0.7
1,153,873	-		MPMX19_03713	0.14	-0.2
1,153,873	-		MPMX19_03713	0.14	-1.5
1,153,873	-		MPMX19_03713	0.14	-2.7
1,153,873	-		MPMX19_03713	0.14	+1.1
1,153,873	-		MPMX19_03713	0.14	-0.5
1,153,873	-		MPMX19_03713	0.14	-0.6
1,153,873	-		MPMX19_03713	0.14	+1.0
1,153,873	-		MPMX19_03713	0.14	+1.0
1,153,873	-		MPMX19_03713	0.14	-0.9
1,153,873	-		MPMX19_03713	0.14	-1.0
1,153,873	-		MPMX19_03713	0.14	+1.3
1,153,873	-		MPMX19_03713	0.14	+0.7
1,153,873	-		MPMX19_03713	0.14	+0.3
1,153,873	-		MPMX19_03713	0.14	-0.2
1,153,873	-		MPMX19_03713	0.14	+0.1
1,153,873	-		MPMX19_03713	0.14	-0.6
1,153,873	-		MPMX19_03713	0.14	-0.5
1,153,873	-		MPMX19_03713	0.14	-1.1
1,153,873	-		MPMX19_03713	0.14	+0.1
1,153,888	-		MPMX19_03713	0.15	-1.2
1,153,888	-		MPMX19_03713	0.15	-0.7
1,153,888	-		MPMX19_03713	0.15	+0.3
1,153,933	-		MPMX19_03713	0.18	-0.2
1,154,022	+		MPMX19_03713	0.24	-1.2
1,154,022	+		MPMX19_03713	0.24	-0.0
1,154,022	+		MPMX19_03713	0.24	-0.0
1,154,022	+		MPMX19_03713	0.24	-1.4
1,154,022	+		MPMX19_03713	0.24	-0.0
1,154,022	+		MPMX19_03713	0.24	+0.4
1,154,022	+		MPMX19_03713	0.24	+0.1
1,154,022	+		MPMX19_03713	0.24	-1.1
1,154,022	+		MPMX19_03713	0.24	-0.7
1,154,022	+		MPMX19_03713	0.24	-0.4
1,154,022	+		MPMX19_03713	0.24	-1.0
1,154,022	+		MPMX19_03713	0.24	+0.0
1,154,022	+		MPMX19_03713	0.24	-0.4
1,154,022	+		MPMX19_03713	0.24	+0.7
1,154,022	+		MPMX19_03713	0.24	-2.3
1,154,022	+		MPMX19_03713	0.24	-0.8
1,154,022	+		MPMX19_03713	0.24	-0.5
1,154,022	+		MPMX19_03713	0.24	+0.3
1,154,022	+		MPMX19_03713	0.24	+0.0
1,154,022	+		MPMX19_03713	0.24	-0.3
1,154,022	+		MPMX19_03713	0.24	+0.4
1,154,022	+		MPMX19_03713	0.24	+0.7
1,154,022	+		MPMX19_03713	0.24	-2.3
1,154,022	+		MPMX19_03713	0.24	-0.3
1,154,023	-		MPMX19_03713	0.24	-0.4
1,154,023	-		MPMX19_03713	0.24	-0.5
1,154,023	-		MPMX19_03713	0.24	-0.9
1,154,023	-		MPMX19_03713	0.24	+1.7
1,154,023	-		MPMX19_03713	0.24	-0.6
1,154,023	-		MPMX19_03713	0.24	-1.6
1,154,023	-		MPMX19_03713	0.24	-0.9
1,154,023	-		MPMX19_03713	0.24	-0.2
1,154,023	-		MPMX19_03713	0.24	-0.6
1,154,023	-		MPMX19_03713	0.24	-2.0
1,154,023	-		MPMX19_03713	0.24	+0.2
1,154,023	-		MPMX19_03713	0.24	+0.5
1,154,023	-		MPMX19_03713	0.24	-1.8
1,154,023	-		MPMX19_03713	0.24	+0.3
1,154,023	-		MPMX19_03713	0.24	-1.1
1,154,023	-		MPMX19_03713	0.24	-1.1
1,154,025	+		MPMX19_03713	0.24	-0.8
1,154,025	+		MPMX19_03713	0.24	-1.7
1,154,026	-		MPMX19_03713	0.24	-1.6
1,154,121	+		MPMX19_03713	0.31	-0.9
1,154,121	+		MPMX19_03713	0.31	-0.2
1,154,121	+		MPMX19_03713	0.31	+0.3
1,154,122	-		MPMX19_03713	0.31	+0.4
1,154,122	-		MPMX19_03713	0.31	-0.3
1,154,122	-		MPMX19_03713	0.31	+0.9
1,154,122	-		MPMX19_03713	0.31	+2.0
1,154,122	-		MPMX19_03713	0.31	-0.3