Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02724

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,864,735	-				-0.8
2,864,735	-				-0.7
2,864,735	-				+1.1
2,864,764	+				+2.9
2,864,764	+				-0.6
2,864,764	+				-1.3
2,864,764	+				+0.4
2,864,764	+				-0.3
2,864,764	+				+0.1
2,864,765	-				+0.3
2,864,765	-				+1.1
2,864,765	-				+0.5
2,864,765	-				-1.0
2,864,765	-				-2.2
2,864,765	-				-1.1
2,864,765	-				+0.2
2,864,766	+				+0.9
2,864,767	-				-0.1
2,864,767	-				+0.5
2,864,996	+		MPMX19_02724	0.29	-1.4
2,864,996	+		MPMX19_02724	0.29	+0.1
2,864,997	-		MPMX19_02724	0.29	-1.8
2,864,997	-		MPMX19_02724	0.29	-1.6
2,864,997	-		MPMX19_02724	0.29	-0.9
2,864,997	-		MPMX19_02724	0.29	-1.4
2,865,059	+		MPMX19_02724	0.37	-0.5
2,865,059	+		MPMX19_02724	0.37	-1.5
2,865,059	+		MPMX19_02724	0.37	-0.4
2,865,059	+		MPMX19_02724	0.37	-1.1
2,865,059	+		MPMX19_02724	0.37	-0.4
2,865,059	+		MPMX19_02724	0.37	+0.4
2,865,059	+		MPMX19_02724	0.37	+0.1
2,865,059	+		MPMX19_02724	0.37	+0.5
2,865,204	+		MPMX19_02724	0.57	+1.7
2,865,204	+		MPMX19_02724	0.57	-0.2
2,865,204	+		MPMX19_02724	0.57	-0.9
2,865,204	+		MPMX19_02724	0.57	-1.1
2,865,204	+		MPMX19_02724	0.57	+1.3
2,865,204	+		MPMX19_02724	0.57	+1.0
2,865,205	-		MPMX19_02724	0.57	+0.6
2,865,205	-		MPMX19_02724	0.57	-0.4
2,865,205	-		MPMX19_02724	0.57	-1.1
2,865,206	+		MPMX19_02724	0.57	-1.7
2,865,206	+		MPMX19_02724	0.57	-1.4
2,865,206	+		MPMX19_02724	0.57	+0.3
2,865,206	+		MPMX19_02724	0.57	-0.3
2,865,206	+		MPMX19_02724	0.57	-0.9
2,865,206	+		MPMX19_02724	0.57	+0.6
2,865,206	+		MPMX19_02724	0.57	-0.5
2,865,206	+		MPMX19_02724	0.57	+0.9
2,865,206	+		MPMX19_02724	0.57	-0.7
2,865,207	-		MPMX19_02724	0.57	+0.0
2,865,207	-		MPMX19_02724	0.57	-1.3
2,865,207	-		MPMX19_02724	0.57	-0.3
2,865,207	-		MPMX19_02724	0.57	-1.8
2,865,207	-		MPMX19_02724	0.57	-1.0
2,865,207	-		MPMX19_02724	0.57	-0.1
2,865,207	-		MPMX19_02724	0.57	-0.8
2,865,207	-		MPMX19_02724	0.57	-0.6
2,865,207	-		MPMX19_02724	0.57	+0.0
2,865,207	-		MPMX19_02724	0.57	-0.4
2,865,341	+		MPMX19_02724	0.75	-0.3
2,865,341	+		MPMX19_02724	0.75	+1.6
2,865,341	+		MPMX19_02724	0.75	-0.1
2,865,341	+		MPMX19_02724	0.75	+0.3
2,865,341	+		MPMX19_02724	0.75	+0.5
2,865,341	+		MPMX19_02724	0.75	+0.4
2,865,341	+		MPMX19_02724	0.75	-2.0
2,865,341	+		MPMX19_02724	0.75	-0.5
2,865,341	+		MPMX19_02724	0.75	+0.2
2,865,342	-		MPMX19_02724	0.76	+0.6
2,865,342	-		MPMX19_02724	0.76	-2.0
2,865,342	-		MPMX19_02724	0.76	-1.1
2,865,342	-		MPMX19_02724	0.76	-1.9
2,865,342	-		MPMX19_02724	0.76	-0.4
2,865,438	+		MPMX19_02724	0.89	-1.4
2,865,438	+		MPMX19_02724	0.89	-0.2
2,865,438	+		MPMX19_02724	0.89	+0.4
2,865,438	+		MPMX19_02724	0.89	+0.1
2,865,438	+		MPMX19_02724	0.89	-0.4
2,865,663	+		MPMX19_02725	0.14	-0.3
2,865,663	+		MPMX19_02725	0.14	+0.6
2,865,663	+		MPMX19_02725	0.14	-0.6
2,865,663	+		MPMX19_02725	0.14	+1.2
2,865,663	+		MPMX19_02725	0.14	-0.7
2,865,663	+		MPMX19_02725	0.14	-1.6
2,865,663	+		MPMX19_02725	0.14	-0.3
2,865,663	+		MPMX19_02725	0.14	-0.0
2,865,663	+		MPMX19_02725	0.14	-2.4
2,865,663	+		MPMX19_02725	0.14	-0.1
2,865,663	+		MPMX19_02725	0.14	+0.6
2,865,663	+		MPMX19_02725	0.14	+1.2
2,865,664	-		MPMX19_02725	0.14	-0.4
2,865,664	-		MPMX19_02725	0.14	-0.4
2,865,664	-		MPMX19_02725	0.14	-0.1
2,865,664	-		MPMX19_02725	0.14	-1.3
2,865,664	-		MPMX19_02725	0.14	+0.2
2,865,664	-		MPMX19_02725	0.14	+0.9
2,865,664	-		MPMX19_02725	0.14	+0.2
2,865,664	-		MPMX19_02725	0.14	+1.4
2,865,664	-		MPMX19_02725	0.14	+1.9
2,865,664	-		MPMX19_02725	0.14	-0.1
2,865,664	-		MPMX19_02725	0.14	-0.4
2,865,793	-		MPMX19_02725	0.26	-0.6
2,865,867	+		MPMX19_02725	0.33	-1.3
2,865,867	+		MPMX19_02725	0.33	-0.7
2,865,867	+		MPMX19_02725	0.33	+0.1
2,865,867	+		MPMX19_02725	0.33	+0.6
2,865,868	-		MPMX19_02725	0.33	+0.4
2,865,868	-		MPMX19_02725	0.33	-0.1
2,865,868	-		MPMX19_02725	0.33	-0.3
2,865,868	-		MPMX19_02725	0.33	-0.4
2,865,868	-		MPMX19_02725	0.33	-0.4
2,865,868	-		MPMX19_02725	0.33	+0.2
2,865,960	+		MPMX19_02725	0.42	-0.1
2,865,960	+		MPMX19_02725	0.42	-1.6
2,865,960	+		MPMX19_02725	0.42	+0.9
2,865,960	+		MPMX19_02725	0.42	-2.1
2,865,960	+		MPMX19_02725	0.42	+1.3
2,865,960	+		MPMX19_02725	0.42	-0.4
2,865,960	+		MPMX19_02725	0.42	-1.6
2,865,960	+		MPMX19_02725	0.42	+0.6
2,865,960	+		MPMX19_02725	0.42	-0.6
2,865,960	+		MPMX19_02725	0.42	+0.0
2,865,961	-		MPMX19_02725	0.42	+0.5
2,865,961	-		MPMX19_02725	0.42	+2.5
2,865,961	-		MPMX19_02725	0.42	+1.1
2,865,961	-		MPMX19_02725	0.42	-0.7
2,866,078	+		MPMX19_02725	0.54	+0.6
2,866,078	+		MPMX19_02725	0.54	-0.3
2,866,078	+		MPMX19_02725	0.54	+1.0
2,866,078	+		MPMX19_02725	0.54	-0.7
2,866,078	+		MPMX19_02725	0.54	-1.3
2,866,078	+		MPMX19_02725	0.54	+0.3
2,866,079	-		MPMX19_02725	0.54	-0.9
2,866,079	-		MPMX19_02725	0.54	-0.7
2,866,079	-		MPMX19_02725	0.54	+1.5
2,866,080	+		MPMX19_02725	0.54	-0.2
2,866,080	+		MPMX19_02725	0.54	-0.9
2,866,080	+		MPMX19_02725	0.54	-0.4
2,866,080	+		MPMX19_02725	0.54	-0.1
2,866,080	+		MPMX19_02725	0.54	+0.1
2,866,080	+		MPMX19_02725	0.54	+1.1
2,866,080	+		MPMX19_02725	0.54	-0.8
2,866,080	+		MPMX19_02725	0.54	+0.6
2,866,080	+		MPMX19_02725	0.54	-1.1
2,866,080	+		MPMX19_02725	0.54	-0.4
2,866,080	+		MPMX19_02725	0.54	-0.1
2,866,080	+		MPMX19_02725	0.54	+0.5
2,866,080	+		MPMX19_02725	0.54	-1.8
2,866,080	+		MPMX19_02725	0.54	-0.3
2,866,080	+		MPMX19_02725	0.54	-1.3
2,866,080	+		MPMX19_02725	0.54	-0.3
2,866,080	+		MPMX19_02725	0.54	-0.7
2,866,080	+		MPMX19_02725	0.54	+0.3
2,866,080	+		MPMX19_02725	0.54	-0.1
2,866,080	+		MPMX19_02725	0.54	+0.7
2,866,080	+		MPMX19_02725	0.54	+0.6
2,866,080	+		MPMX19_02725	0.54	-0.9
2,866,080	+		MPMX19_02725	0.54	-0.8
2,866,080	+		MPMX19_02725	0.54	-1.1
2,866,080	+		MPMX19_02725	0.54	-1.1
2,866,080	+		MPMX19_02725	0.54	+0.6
2,866,080	+		MPMX19_02725	0.54	-0.4
2,866,080	+		MPMX19_02725	0.54	-0.9
2,866,080	+		MPMX19_02725	0.54	-0.3
2,866,080	+		MPMX19_02725	0.54	-2.0
2,866,080	+		MPMX19_02725	0.54	-0.4
2,866,080	+		MPMX19_02725	0.54	+0.5
2,866,080	+		MPMX19_02725	0.54	-1.1
2,866,080	+		MPMX19_02725	0.54	+1.4
2,866,080	+		MPMX19_02725	0.54	+0.3
2,866,080	+		MPMX19_02725	0.54	+0.7
2,866,080	+		MPMX19_02725	0.54	+0.0
2,866,080	+		MPMX19_02725	0.54	-0.3
2,866,081	-		MPMX19_02725	0.54	-0.1
2,866,081	-		MPMX19_02725	0.54	-1.2
2,866,081	-		MPMX19_02725	0.54	-0.1
2,866,081	-		MPMX19_02725	0.54	-0.1
2,866,081	-		MPMX19_02725	0.54	-0.7
2,866,081	-		MPMX19_02725	0.54	-0.1
2,866,081	-		MPMX19_02725	0.54	-0.2
2,866,081	-		MPMX19_02725	0.54	+0.8
2,866,081	-		MPMX19_02725	0.54	+0.1
2,866,081	-		MPMX19_02725	0.54	-0.3
2,866,081	-		MPMX19_02725	0.54	-0.6
2,866,081	-		MPMX19_02725	0.54	+1.1
2,866,081	-		MPMX19_02725	0.54	-0.2
2,866,081	-		MPMX19_02725	0.54	-1.4
2,866,081	-		MPMX19_02725	0.54	+0.1
2,866,081	-		MPMX19_02725	0.54	+0.1
2,866,081	-		MPMX19_02725	0.54	-0.4
2,866,081	-		MPMX19_02725	0.54	+0.1
2,866,081	-		MPMX19_02725	0.54	+0.7
2,866,081	-		MPMX19_02725	0.54	-1.7
2,866,081	-		MPMX19_02725	0.54	-0.4
2,866,081	-		MPMX19_02725	0.54	-1.6
2,866,081	-		MPMX19_02725	0.54	+0.7
2,866,081	-		MPMX19_02725	0.54	-2.2
2,866,081	-		MPMX19_02725	0.54	-0.7
2,866,081	-		MPMX19_02725	0.54	-1.3
2,866,081	-		MPMX19_02725	0.54	+0.5
2,866,081	-		MPMX19_02725	0.54	+0.1
2,866,081	-		MPMX19_02725	0.54	-1.3
2,866,081	-		MPMX19_02725	0.54	-1.6
2,866,128	+		MPMX19_02725	0.59	-0.0
2,866,128	+		MPMX19_02725	0.59	+0.2
2,866,128	+		MPMX19_02725	0.59	-1.7
2,866,128	+		MPMX19_02725	0.59	+0.9
2,866,128	+		MPMX19_02725	0.59	+1.6
2,866,128	+		MPMX19_02725	0.59	-1.8
2,866,128	+		MPMX19_02725	0.59	-0.1
2,866,128	+		MPMX19_02725	0.59	+0.2
2,866,128	+		MPMX19_02725	0.59	+1.1
2,866,128	+		MPMX19_02725	0.59	+0.5
2,866,128	+		MPMX19_02725	0.59	-0.4
2,866,128	+		MPMX19_02725	0.59	-2.3
2,866,128	+		MPMX19_02725	0.59	+0.3
2,866,129	-		MPMX19_02725	0.59	-0.1
2,866,129	-		MPMX19_02725	0.59	+0.3
2,866,129	-		MPMX19_02725	0.59	-0.3
2,866,129	-		MPMX19_02725	0.59	-0.2
2,866,129	-		MPMX19_02725	0.59	-0.3
2,866,129	-		MPMX19_02725	0.59	+0.4
2,866,129	-		MPMX19_02725	0.59	-0.2
2,866,129	-		MPMX19_02725	0.59	-0.4
2,866,129	-		MPMX19_02725	0.59	-0.1
2,866,129	-		MPMX19_02725	0.59	-0.0
2,866,129	-		MPMX19_02725	0.59	-0.1
2,866,129	-		MPMX19_02725	0.59	-2.3
2,866,129	-		MPMX19_02725	0.59	-1.2
2,866,129	-		MPMX19_02725	0.59	+0.5
2,866,129	-		MPMX19_02725	0.59	-0.3
2,866,129	-		MPMX19_02725	0.59	-1.7
2,866,209	+		MPMX19_02725	0.67	-0.1
2,866,209	+		MPMX19_02725	0.67	-0.8
2,866,209	+		MPMX19_02725	0.67	-0.1
2,866,209	+		MPMX19_02725	0.67	-1.8
2,866,209	+		MPMX19_02725	0.67	-0.2
2,866,210	-		MPMX19_02725	0.67	-0.9
2,866,210	-		MPMX19_02725	0.67	-1.0
2,866,210	-		MPMX19_02725	0.67	-0.6
2,866,210	-		MPMX19_02725	0.67	-1.8
2,866,440	+		MPMX19_02725	0.89	-0.1
2,866,440	+		MPMX19_02725	0.89	-0.1
2,866,441	-		MPMX19_02725	0.89	+0.4
2,866,441	-		MPMX19_02725	0.89	+0.3