Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02413

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,532,314	-				-1.8
2,532,314	-				+0.9
2,532,314	-				+0.4
2,532,314	-				+1.5
2,532,314	-				-0.9
2,532,314	-				+0.1
2,532,314	-				-1.6
2,532,314	-				-2.4
2,532,314	-				+1.3
2,532,314	-				+1.5
2,532,314	-				-0.4
2,532,334	-				-1.7
2,532,334	-				-1.5
2,532,334	-				-0.3
2,532,334	-				-0.4
2,532,334	-				-1.8
2,532,445	+				+0.1
2,532,445	+				-0.9
2,532,445	+				+0.3
2,532,445	+				+0.2
2,532,446	-				+0.5
2,532,446	-				-0.0
2,532,448	+				+0.3
2,532,448	+				+1.5
2,532,448	+				-0.4
2,532,448	+				+0.1
2,532,448	+				-1.9
2,532,449	-				-0.2
2,532,449	-				+0.3
2,532,449	-				+1.4
2,532,449	-				-0.1
2,532,495	+				-0.9
2,532,495	+				-0.5
2,532,495	+				-1.5
2,532,495	+				-0.1
2,532,495	+				+1.1
2,532,495	+				+0.5
2,532,496	-				-0.9
2,532,496	-				-2.7
2,532,496	-				+1.1
2,532,496	-				-0.3
2,532,496	-				+1.9
2,532,496	-				+0.5
2,532,496	-				-0.3
2,532,534	+		MPMX19_02412	0.15	-0.6
2,532,534	+		MPMX19_02412	0.15	-0.9
2,532,534	+		MPMX19_02412	0.15	+0.2
2,532,534	+		MPMX19_02412	0.15	+0.7
2,532,534	+		MPMX19_02412	0.15	-0.9
2,532,534	+		MPMX19_02412	0.15	-0.0
2,532,534	+		MPMX19_02412	0.15	+0.1
2,532,534	+		MPMX19_02412	0.15	+1.3
2,532,534	+		MPMX19_02412	0.15	-0.1
2,532,534	+		MPMX19_02412	0.15	-0.3
2,532,534	+		MPMX19_02412	0.15	-0.6
2,532,534	+		MPMX19_02412	0.15	+0.3
2,532,535	-		MPMX19_02412	0.16	-0.5
2,532,535	-		MPMX19_02412	0.16	-0.3
2,532,535	-		MPMX19_02412	0.16	+1.1
2,532,535	-		MPMX19_02412	0.16	-0.1
2,532,535	-		MPMX19_02412	0.16	-0.5
2,532,535	-		MPMX19_02412	0.16	+0.5
2,532,535	-		MPMX19_02412	0.16	-0.7
2,532,535	-		MPMX19_02412	0.16	+0.6
2,532,544	+		MPMX19_02412	0.19	+0.6
2,532,544	+		MPMX19_02412	0.19	-0.5
2,532,544	+		MPMX19_02412	0.19	-1.2
2,532,545	-		MPMX19_02412	0.19	+0.9
2,532,545	-		MPMX19_02412	0.19	-1.7
2,532,545	-		MPMX19_02412	0.19	+0.1
2,532,636	+		MPMX19_02412	0.54	+0.0
2,532,684	+		MPMX19_02412	0.72	+0.6
2,532,684	+		MPMX19_02412	0.72	-0.8
2,532,684	+		MPMX19_02412	0.72	-0.2
2,532,684	+		MPMX19_02412	0.72	+0.2
2,532,684	+		MPMX19_02412	0.72	+0.1
2,532,685	-		MPMX19_02412	0.72	+0.3
2,532,685	-		MPMX19_02412	0.72	-0.3
2,532,685	-		MPMX19_02412	0.72	-0.5
2,532,685	-		MPMX19_02412	0.72	-1.7
2,532,685	-		MPMX19_02412	0.72	+0.6
2,532,685	-		MPMX19_02412	0.72	+0.7
2,532,685	-		MPMX19_02412	0.72	-1.7
2,532,685	-		MPMX19_02412	0.72	+0.0
2,532,685	-		MPMX19_02412	0.72	+0.2
2,532,685	-		MPMX19_02412	0.72	-0.7
2,532,685	-		MPMX19_02412	0.72	-0.8
2,532,685	-		MPMX19_02412	0.72	-0.4
2,532,685	-		MPMX19_02412	0.72	-0.4
2,532,685	-		MPMX19_02412	0.72	-0.3
2,532,861	+				+2.1
2,532,862	-				+0.9
2,532,862	-				-0.7
2,532,931	+				-0.9
2,532,931	+				+0.0
2,532,931	+				+1.0
2,532,931	+				-0.3
2,532,931	+				-1.6
2,532,931	+				+0.7
2,532,932	-				-1.1
2,532,932	-				-0.5
2,532,932	-				+0.3
2,532,932	-				+0.4
2,532,932	-				-0.3
2,532,932	-				-0.5
2,533,027	+				-0.9
2,533,027	+				-0.0
2,533,027	+				-1.1
2,533,027	+				+0.3
2,533,027	+				-1.6
2,533,027	+				+1.2
2,533,028	-				-1.7
2,533,028	-				+0.9
2,533,028	-				-1.3
2,533,028	-				+0.9
2,533,171	+		MPMX19_02413	0.12	-0.7
2,533,171	+		MPMX19_02413	0.12	+1.4
2,533,172	-		MPMX19_02413	0.12	-1.2
2,533,172	-		MPMX19_02413	0.12	-0.5
2,533,172	-		MPMX19_02413	0.12	-0.6
2,533,231	+		MPMX19_02413	0.18	-0.4
2,533,231	+		MPMX19_02413	0.18	-1.0
2,533,231	+		MPMX19_02413	0.18	-1.3
2,533,231	+		MPMX19_02413	0.18	+1.0
2,533,231	+		MPMX19_02413	0.18	-0.7
2,533,232	-		MPMX19_02413	0.18	+0.6
2,533,232	-		MPMX19_02413	0.18	-1.6
2,533,232	-		MPMX19_02413	0.18	-1.3
2,533,232	-		MPMX19_02413	0.18	-0.7
2,533,232	-		MPMX19_02413	0.18	-0.5
2,533,232	-		MPMX19_02413	0.18	-0.9
2,533,351	+		MPMX19_02413	0.28	+2.7
2,533,351	+		MPMX19_02413	0.28	-1.7
2,533,351	+		MPMX19_02413	0.28	-0.6
2,533,352	-		MPMX19_02413	0.28	+0.4
2,533,352	-		MPMX19_02413	0.28	-0.6
2,533,352	-		MPMX19_02413	0.28	-1.3
2,533,352	-		MPMX19_02413	0.28	-0.1
2,533,352	-		MPMX19_02413	0.28	-0.1
2,533,352	-		MPMX19_02413	0.28	-1.1
2,533,352	-		MPMX19_02413	0.28	-0.0
2,533,391	-		MPMX19_02413	0.31	-1.1
2,533,391	-		MPMX19_02413	0.31	+1.1
2,533,426	+		MPMX19_02413	0.34	-0.5
2,533,426	+		MPMX19_02413	0.34	+0.1
2,533,426	+		MPMX19_02413	0.34	+0.1
2,533,427	-		MPMX19_02413	0.34	-1.1
2,533,427	-		MPMX19_02413	0.34	-0.1
2,533,627	+		MPMX19_02413	0.51	+0.4
2,533,627	+		MPMX19_02413	0.51	+1.9
2,533,627	+		MPMX19_02413	0.51	-0.9
2,533,627	+		MPMX19_02413	0.51	-0.3
2,533,628	-		MPMX19_02413	0.51	+0.4
2,533,628	-		MPMX19_02413	0.51	+0.8
2,533,628	-		MPMX19_02413	0.51	+0.1
2,533,628	-		MPMX19_02413	0.51	-1.1
2,533,628	-		MPMX19_02413	0.51	-1.6
2,533,963	+		MPMX19_02413	0.80	-1.3
2,533,963	+		MPMX19_02413	0.80	-0.4
2,533,963	+		MPMX19_02413	0.80	+0.7
2,533,963	+		MPMX19_02413	0.80	+0.3
2,533,963	+		MPMX19_02413	0.80	+0.8
2,533,963	+		MPMX19_02413	0.80	-0.1
2,533,963	+		MPMX19_02413	0.80	+0.9
2,533,963	+		MPMX19_02413	0.80	+0.7
2,533,963	+		MPMX19_02413	0.80	-0.5
2,533,963	+		MPMX19_02413	0.80	+1.3
2,533,963	+		MPMX19_02413	0.80	+0.3
2,533,963	+		MPMX19_02413	0.80	+0.6
2,533,963	+		MPMX19_02413	0.80	-3.2
2,533,963	+		MPMX19_02413	0.80	+0.2
2,533,963	+		MPMX19_02413	0.80	+1.1
2,533,964	-		MPMX19_02413	0.80	+1.0
2,533,964	-		MPMX19_02413	0.80	-1.3
2,533,964	-		MPMX19_02413	0.80	+0.9
2,533,964	-		MPMX19_02413	0.80	+0.4
2,533,964	-		MPMX19_02413	0.80	+0.0
2,533,964	-		MPMX19_02413	0.80	+1.9
2,533,964	-		MPMX19_02413	0.80	+0.4
2,533,964	-		MPMX19_02413	0.80	-0.5
2,533,964	-		MPMX19_02413	0.80	-0.1
2,533,964	-		MPMX19_02413	0.80	+0.7
2,533,964	-		MPMX19_02413	0.80	-0.5
2,533,964	-		MPMX19_02413	0.80	-0.7
2,533,964	-		MPMX19_02413	0.80	+0.2
2,533,964	-		MPMX19_02413	0.80	-0.5
2,533,964	-		MPMX19_02413	0.80	+0.3
2,533,964	-		MPMX19_02413	0.80	-1.5
2,533,964	-		MPMX19_02413	0.80	-0.4
2,533,964	-		MPMX19_02413	0.80	+0.6
2,533,964	-		MPMX19_02413	0.80	-0.4
2,533,964	-		MPMX19_02413	0.80	-2.3
2,533,964	-		MPMX19_02413	0.80	-0.9
2,533,964	-		MPMX19_02413	0.80	-0.4
2,533,964	-		MPMX19_02413	0.80	-1.1
2,533,964	-		MPMX19_02413	0.80	-3.3
2,533,964	-		MPMX19_02413	0.80	+1.1
2,534,038	+		MPMX19_02413	0.86	-0.0
2,534,038	+		MPMX19_02413	0.86	-0.0
2,534,038	+		MPMX19_02413	0.86	-0.6
2,534,038	+		MPMX19_02413	0.86	-1.7
2,534,038	+		MPMX19_02413	0.86	+0.7
2,534,038	+		MPMX19_02413	0.86	-0.3
2,534,038	+		MPMX19_02413	0.86	-0.3
2,534,039	-		MPMX19_02413	0.87	+0.2
2,534,204	+				-0.7
2,534,204	+				-0.6
2,534,204	+				-0.9
2,534,204	+				+0.7
2,534,204	+				+0.2
2,534,205	-				-1.7
2,534,205	-				-0.5
2,534,205	-				-1.5
2,534,205	-				-0.9
2,534,205	-				+1.1
2,534,205	-				-1.5
2,534,205	-				+0.3
2,534,205	-				+0.9
2,534,205	-				-1.7
2,534,208	+				-0.9
2,534,208	+				-0.9
2,534,209	-				-1.6
2,534,209	-				-0.5
2,534,209	-				+0.1
2,534,209	-				-0.4
2,534,259	-				-1.1
2,534,259	-				-2.2
2,534,259	-				-0.6
2,534,312	-				-0.1
2,534,590	+		MPMX19_02414	0.56	-0.9
2,534,644	+		MPMX19_02414	0.65	-1.5
2,534,644	+		MPMX19_02414	0.65	+0.1
2,534,644	+		MPMX19_02414	0.65	+0.6
2,534,983	+				+0.5
2,534,983	+				-2.5
2,534,983	+				-1.1
2,534,983	+				-0.5
2,534,983	+				+1.9
2,534,983	+				+0.4
2,534,983	+				-0.8
2,534,984	-				+0.5
2,534,984	-				-1.4
2,534,984	-				+0.6
2,534,984	-				-1.5
2,534,984	-				+1.3
2,535,002	+				-0.6
2,535,002	+				+0.3
2,535,003	-				+0.2
2,535,003	-				-0.5
2,535,003	-				+0.5
2,535,036	+				+0.7
2,535,036	+				+1.0
2,535,036	+				+0.7
2,535,036	+				-0.3
2,535,037	-				-0.1
2,535,037	-				+0.1
2,535,037	-				+0.1
2,535,038	+				-0.5
2,535,038	+				-0.2
2,535,038	+				-1.1
2,535,038	+				-0.3
2,535,038	+				-1.5
2,535,038	+				-1.0
2,535,038	+				-1.1
2,535,039	-				-1.1
2,535,083	+				+0.5
2,535,083	+				-1.0
2,535,083	+				+0.3
2,535,083	+				-0.6
2,535,083	+				-0.0
2,535,084	-				-1.3
2,535,084	-				+0.9